| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1117 |
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| Symbol | |
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| ID | 4258759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1293573 |
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| End bp | 1294751 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638121738 |
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| Product | trimethylamine-N-oxide reductase c-type cytochrome TorC |
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| Protein accession | YP_737173 |
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| Protein GI | 114046623 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
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| TIGRFAM ID | [TIGR02162] trimethylamine-N-oxide reductase c-type cytochrome TorC |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.514316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTGGT TAACCAACCT CTGGCGCACA CTAAACAAAC CCACAAAAGC TCTCACCTTA
GGCGCTGTCA GCATCAGTGC TTTTATCATG GGCATCATCT TCTGGGGCGG ATTTAACACC
GCACTGGAAG CCACCAATAC CGAAGCCTTC TGTATCAGCT GCCACAGTAT GGAAAGCAAG
CCTTACCAAG AGTTACAGGA AACGGTGCAT TGGTCGAATC ACTCTGGCGT GCGCGCCACC
TGCCCCGACT GCCACGTGCC CCACAACTGG AGCCGTAAGA TTGCCCGTAA GATGGAAGCT
TCCCACGATG TTTGGGGCTG GTTATTCAAT ACGGTCAACA CCCCTGAAAA ATTTGAAGCT
AAACGCCTCG AAATGGCGAG CCGCGAATGG AAACGTTTCG ATCGCGACAA TTCTCTGGCC
TGTAAAAACT GCCACAACTA CAACTCGATG AAGTGGGAAA GCATGTCACC ACTGGCGCAA
AAACAGATGA AACGCGCCGC CGAAATCGAC CAAAGCTGTA TCGATTGCCA CAAAGGTATT
GCCCACCATT TACCTGAAAT GGGCACGGCC CGCGCACCCG AACTCATCGC CGAAGTGGGT
GCAGGCGTCA GCTCAGTCGA AACCAACCAA ACCTACTACA GCGCCCTGAC TAAGCCACTG
TTCTTTAGTG AAAAAGGTGA CGTTGAAGCC GGTACCTTAA ACGTAGCCAC TAAAGTCAAA
GTGCTCGAAA CCCAAGGTAA GCGCATCAAA ATTGGCATCG ATGGCTGGCG TAAGAAAATC
GGCGCAGGCC GCGTGATCTA CATGGACTTT GGGGTAAACA TTCTGTCGGC GCAGTTAAGC
AAAGATGCCG CCGAAACCGA AGGTGTTATC CAAACCTTTG AAGAGAAAGA AGACCCAATG
ACAGGCCTGA AATGGCAACG GGTTGAAGCC CAAATCTGGA CCGATAAGGA TTACCTGCTC
ACCGAGCTAC AACCACTCTG GGGATATGCC CGCGATACGT TCCGCTCAAG CTGTAGCGTG
TGCCACACCC AGCCAGATGA AGCGCATTTC GATGCCAATA CCTGGCCTGG CATGTTCCAA
GGCATGTTAG CCTTCGTGAA CATGGACCAA GACACCCAAG CGCTGGTGCA GAAATACCTG
CAGGAACATT CGTCAACCTT CGTGAAAAAA GAGCACTAA
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| Protein sequence | MKWLTNLWRT LNKPTKALTL GAVSISAFIM GIIFWGGFNT ALEATNTEAF CISCHSMESK
PYQELQETVH WSNHSGVRAT CPDCHVPHNW SRKIARKMEA SHDVWGWLFN TVNTPEKFEA
KRLEMASREW KRFDRDNSLA CKNCHNYNSM KWESMSPLAQ KQMKRAAEID QSCIDCHKGI
AHHLPEMGTA RAPELIAEVG AGVSSVETNQ TYYSALTKPL FFSEKGDVEA GTLNVATKVK
VLETQGKRIK IGIDGWRKKI GAGRVIYMDF GVNILSAQLS KDAAETEGVI QTFEEKEDPM
TGLKWQRVEA QIWTDKDYLL TELQPLWGYA RDTFRSSCSV CHTQPDEAHF DANTWPGMFQ
GMLAFVNMDQ DTQALVQKYL QEHSSTFVKK EH
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