Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1110 |
Symbol | |
ID | 4258752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1283081 |
End bp | 1284445 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 638121731 |
Product | DNA repair protein RadA |
Protein accession | YP_737166 |
Protein GI | 114046616 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAGA ATAAAACCGC GTACGTGTGC AATGAGTGTG GACAGGATTT TCCACGCTGG CAAGGGCAAT GCAGTGCTTG TCAGGAGTGG AATACGATAA CTGAAGTGCG CTTAGGTGCC GCCTCGCCCG GACGGGGAAC TAAGTTTGCG GGTTATGCCG GTGCAGGTAG TAGCGAAGTC AAAACCTTAG ACCAAATTGA CCTCAATGCC TTGCCACGGA TTGTGAGCCA TTTTGGCGAG CTCGACCGTG TGCTCGGGGG AGGCATAGTG CCAGGCTCTG CAATTCTGAT TGGCGGTCAT CCCGGTGCGG GTAAGAGTAC GCTGTTACTC CAAACCCTGT GCCATTTAGC CGAGCAAATG CCTGCGCTCT ATGTGACGGG TGAAGAGTCC CTGCAGCAAG TCGCTATGCG CGCCCATCGC TTAGGGCTGC CGACCAATAA ACTGAGGATG TTATCCGAGA CCAGTGTGGA GCAGATCTGC GAAGTCGCCC TGCAAGAATC GCCAAAAGTC ATCGTCGTCG ACTCTATTCA AGTCATGCAT ATGAGCGATG TGGCGTCGAG CCCAGGCAGT GTGTCGCAGG TACGTGAATC GGCCTCCTAT TTAACTCGCT TTGCCAAGCA AAACGGTATC GCCGTGATCA TGGTCGGCCA TGTGACCAAA GACGGCAGCC TCGCCGGGCC TAAAGTGCTT GAGCACTGTA TCGATTGTTC TGTGATGTTT GAAGGGGATA GCGACAGCCG TTATCGCACC TTGCGCTCCC ACAAGAACCG GTTCGGGGCG ATTAACGAGT TAGGCGTATT CGCCATGACC GAGCGTGGTT TGAAGGAAGT GGCTAACCCT TCAGCGATTT TCCTCTCCCG CGGCGAGGAG GAGTCCTCGG GCTCCTTAGT GATGGTGGTA TGGGAAGGCA CGCGCCCGCT GTTGGTAGAA CTTCAGGTGC TAGTGGATAA TTCGGCGATG TCGAACCCGC GCCGCGTCGC TGTGGGCATG GATGCGAACC GTTTAGCCAT GTTACTGGCA GTGATGCATC GCCATGGTGG GTTACAAATG TCGGATCAGG ATGTGTTTGT CAACGTCGTT GGCGGGGTTA AAGTGACGGA AACCAGTGCC GACTTAACCT TGCTGCTGGC CATGGTATCG AGTTTCCGTG GCGATATTTT ACCGAGCGAT TTAGTGGTGT TCGGTGAAGT GGGCTTATCT GGGGAAATTC GCCCCGTGCC CAATGGTCAA GAACGTTTAG TTGAAGCCGC CAAACATGGT TTTAAGCGAG CGATCGTGCC CCGTGCCAAT GTGCCGAAAA AGCCGCCAGC GGGCATGGAA GTAGTGGGCG TGGCAAAATT ATCCGAAGCC CTCGAAGCGA TATAA
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Protein sequence | MAKNKTAYVC NECGQDFPRW QGQCSACQEW NTITEVRLGA ASPGRGTKFA GYAGAGSSEV KTLDQIDLNA LPRIVSHFGE LDRVLGGGIV PGSAILIGGH PGAGKSTLLL QTLCHLAEQM PALYVTGEES LQQVAMRAHR LGLPTNKLRM LSETSVEQIC EVALQESPKV IVVDSIQVMH MSDVASSPGS VSQVRESASY LTRFAKQNGI AVIMVGHVTK DGSLAGPKVL EHCIDCSVMF EGDSDSRYRT LRSHKNRFGA INELGVFAMT ERGLKEVANP SAIFLSRGEE ESSGSLVMVV WEGTRPLLVE LQVLVDNSAM SNPRRVAVGM DANRLAMLLA VMHRHGGLQM SDQDVFVNVV GGVKVTETSA DLTLLLAMVS SFRGDILPSD LVVFGEVGLS GEIRPVPNGQ ERLVEAAKHG FKRAIVPRAN VPKKPPAGME VVGVAKLSEA LEAI
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