| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1101 |
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| Symbol | |
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| ID | 4258672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1271481 |
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| End bp | 1272320 |
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| Gene Length | 840 bp |
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| Protein Length | 279 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638121722 |
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| Product | nucleoside-specific channel-forming protein, Tsx |
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| Protein accession | YP_737157 |
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| Protein GI | 114046607 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3248] Nucleoside-binding outer membrane protein |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000152935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000213544 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAAAACG TTAAAACTTT AGCTTTAGCT GCTACAGCAG TAGCTGCAAT CTCTGGTAAC
GCATTTGCTG CAGATCGTAC AGACCTTCAC GGTTCTGACT ACAAGTGGAT GCAGTTCAAC
GCTATGTACT CTATCGGCGA AAAGCCTGAT AACCCAGCTT CTGGCGACCA ACACAACTAC
TTAGAAATGG AGTTCGGCGG CCGCTCTGGT ATTTTCGATC TCTATGGTTA TGTTGACGTA
TTCAACTTAG CAAACGAGAG CAGCAAAGAC GGTGACAAGA ACCCAGGTTC AGGCACCAGC
AAACTGTTCA TGAAATTTGC TCCACGTGTT TCTATCGATG CATTAACGGG CAAAGATTTA
TCTTTTGGTC CAATCCAAGA AGTTTACTTC TCTACTCTGT TCAACTGGGA CGGTCTGAAC
GGTGAAGGCG TTAACTCTAC TTTCTGGGGT GTTGGTGCTG ACGTAAACGT GCCTTGGTTA
GGCAAAACAG GTATGAACCT GTACGGTTAC TACGACATGA ACGCGAAAGA GTGGAACGGT
TACCAATTCT CTGCTAACTG GTTCAAGCCT TTCTACTTCT TCGACAATAA GAGCTTCCTG
TCATTCCAAG GTTACATCGA TTACCAATTC GGTGCTGACG AAGACAAGAC TGCTTTCGTA
CCAAAAACCT CTAACGGTGG TAACATCTTC TTCGGTCTAT ACTGGCACTC AGATCGTTAC
GCTCTGGGCT ATGGCCTGAA AGGCTTCAAA GACGTTTACC TGTTAGAAGA CGGTGCTGGT
GCACTGGCTC TAGAATCAAC AGGTTGGTCA CACTACCTGT CAGCTACTTA CAAGTTCTAA
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| Protein sequence | MKNVKTLALA ATAVAAISGN AFAADRTDLH GSDYKWMQFN AMYSIGEKPD NPASGDQHNY
LEMEFGGRSG IFDLYGYVDV FNLANESSKD GDKNPGSGTS KLFMKFAPRV SIDALTGKDL
SFGPIQEVYF STLFNWDGLN GEGVNSTFWG VGADVNVPWL GKTGMNLYGY YDMNAKEWNG
YQFSANWFKP FYFFDNKSFL SFQGYIDYQF GADEDKTAFV PKTSNGGNIF FGLYWHSDRY
ALGYGLKGFK DVYLLEDGAG ALALESTGWS HYLSATYKF
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