Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1099 |
Symbol | |
ID | 4258670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1268943 |
End bp | 1269710 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638121720 |
Product | TatD-related deoxyribonuclease |
Protein accession | YP_737155 |
Protein GI | 114046605 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00265668 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000022958 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGATGCTAG ATACTCATGC GCACCTCGAT TTCGTTGAGT TTGATAGTGA CCGCGAACAG GTCGTGCAGC GTATGCGACA AGCGGGCATC GACAATCTGA TCATCCCGGG AGTTTCTCCC GAGCATTGGC CAAAACAATT GGCGATTGCT GAACAATATC AGTGTTATTT TGCCTTAGGG ATCCATCCTT GGTTTTGCCC CGAAGATGTT GATAAGGCCA TCACAGAATT AACATTTCAG GTTTCTCAGT TACGAGAATG TCCCCGTTTT GTTGCTATTG GTGAATGTGG TTTAGACAAA CTTTATGCTG ATAATTGGAG TCAGCAGTTA GCCTTTTTTG ACGCGCAACT CACCCTTGCC CATGAGCTGA ACCTGCCCGT TATTGTCCAT GCCGTCAGAG CTCACCAAGA GGTATTGTCC CATTTAAAAC GCCATAAACT CGCCAAAGGT GGCGTAATAC ACGCCTTTTC TGGCAGTCCC GATATTGCGG CCCAATATAT CAAGCTGGGT TTTAAGTTAG GAATTGGCGG ATTAGTCATG AATCCTAATG CGAAAAAACT GCTTAAAACC GTCAGCGAAT TGCCCCTAGA CAGCTTCCTA CTTGAGACTG ATTCTCCTGC CATGACCCCG TTAAATGTTA TCGAAAAACG GAATCAACCC GCTAATGCTG TACTTTTTAT AGACAAAATC GCAACTTTGC AAAAAAAATC TAGTGTTCTA ATATCAGAAC ACTTGGTGTC GAATGCAATG CAACTGTTTG ACCTTTAG
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Protein sequence | MMLDTHAHLD FVEFDSDREQ VVQRMRQAGI DNLIIPGVSP EHWPKQLAIA EQYQCYFALG IHPWFCPEDV DKAITELTFQ VSQLRECPRF VAIGECGLDK LYADNWSQQL AFFDAQLTLA HELNLPVIVH AVRAHQEVLS HLKRHKLAKG GVIHAFSGSP DIAAQYIKLG FKLGIGGLVM NPNAKKLLKT VSELPLDSFL LETDSPAMTP LNVIEKRNQP ANAVLFIDKI ATLQKKSSVL ISEHLVSNAM QLFDL
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