Gene Shewmr7_1086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1086 
SymbolglmM 
ID4257993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1251881 
End bp1253218 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content50% 
IMG OID638121705 
Productphosphoglucosamine mutase 
Protein accessionYP_737142 
Protein GI114046592 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1109] Phosphomannomutase 
TIGRFAM ID[TIGR01455] phosphoglucosamine mutase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00718811 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0720615 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC GTAAATTTTT TGGAACCGAT GGTATTCGTG GCAAGGTAGG TTCAGGCCAG 
ATGACTCCCG AGCTGGCATT AAAGTTGGGG TGGGCTGCTG GACGTGTGTT ATCCCGCAGC
GGCACAAACA AAGTGATTAT TGGTAAAGAT ACCCGTATTT CCGGTTATAT GTTTGAGTCT
GCCTTAGAGG CAGGCCTTTC GGCTGCGGGC CTCAATGTGA TGTTAATGGG ACCCATGCCA
ACACCCGCTG TGGCATATCT TACTCGCACT TTCCGCGCCG AAGCGGGTGT GGTGATCAGT
GCATCCCACA ATCCATACTA TGATAACGGC ATTAAATTTT TCTCCAATGA TGGCAGCAAG
CTCGATGATA ACTTAGAGCT CGAAATTGAA GCCGAATTAG AAAAGCCCTT AGAGTGTGTT
GAGTCGCATT TATTGGGCAA AGTGTCACGC ATTGAAGATG CCCGTGGTCG TTATATCGAA
TATTGCAAGG GTAACTTCCC TGCGGATCAA ACCCTAACAG GGTTAAAAAT TGTGGTGGAC
TGTGCTCACG GTGCGACCTA TCACATTGCA CCTGCGGTAT TCCGTGAGTT AGGTGCAGAG
GTGATTGCTA TTGGTGATAA GCCCAATGGC GTTAACATCA ATGACAAAGT GGGCGCCACG
TCCATGGCGA AAATTTGTGA AACCGTATTA ACCGAAGGCG CCGATTTAGG GATTGCTCTT
GATGGTGACG GCGACCGTAT TATGATGGTC AACAGCCGCG GTGAAGTCAT CGACGGCGAT
CAAATTCTAT ATATTCTGGC CTGTGATGCT AAGGCTCGTG GCGTGCTGCG CGGTGGCGTT
GTAGGGACGC TCATGTCTAA TCTCGGTCTC GATTTAGCCC TGCAAGCCTT AGATATTCCT
TTTGCTCGCT CTAAAGTGGG TGACCGTTAT GTGATGGAGT TACTGAAAGA GCTCGATTGG
CGCATCGGCG GTGAAAACTC GGGTCACATT CTAAACCTCG ACCATGGCAC GACGGGTGAT
GGTATCGTGG CGGGGATCTT GGTGCTGGCG GCAATGCGTC GACAAAATGC CACTTTAGAA
CAACTTACTG CCCCGATGGA GATGCTGCCA CAGGTGTTAG TCAATGTGCG TTTTGAGGGC
GAACACGACC CTTTAAGCTC TGATAAAGTT AAAGCCGCTC AAGCTCAGGT TGAATCACAA
CTGGGTGCCC GAGGTCGCGT ATTGCTACGT AAATCAGGTA CTGAACCGTT AATTCGCGTG
ATGGTTGAAG GCGATGATCA CAATACTGTG TTAGCGCACG CCAATTTGAT CGCAGATGCG
GTAAAATCGG CGAGCTAA
 
Protein sequence
MSERKFFGTD GIRGKVGSGQ MTPELALKLG WAAGRVLSRS GTNKVIIGKD TRISGYMFES 
ALEAGLSAAG LNVMLMGPMP TPAVAYLTRT FRAEAGVVIS ASHNPYYDNG IKFFSNDGSK
LDDNLELEIE AELEKPLECV ESHLLGKVSR IEDARGRYIE YCKGNFPADQ TLTGLKIVVD
CAHGATYHIA PAVFRELGAE VIAIGDKPNG VNINDKVGAT SMAKICETVL TEGADLGIAL
DGDGDRIMMV NSRGEVIDGD QILYILACDA KARGVLRGGV VGTLMSNLGL DLALQALDIP
FARSKVGDRY VMELLKELDW RIGGENSGHI LNLDHGTTGD GIVAGILVLA AMRRQNATLE
QLTAPMEMLP QVLVNVRFEG EHDPLSSDKV KAAQAQVESQ LGARGRVLLR KSGTEPLIRV
MVEGDDHNTV LAHANLIADA VKSAS