| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1084 |
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| Symbol | |
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| ID | 4257991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1248841 |
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| End bp | 1250814 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638121703 |
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| Product | membrane protease FtsH catalytic subunit |
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| Protein accession | YP_737140 |
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| Protein GI | 114046590 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000445375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0888545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGTCTA GTAATTTGAG TGACATGGCA AAAAATCTAA TACTCTGGGT TGTCATCGCC
GTTGTGCTGA TGTCAGTGTT TCAGGGTTAC TCCCCCTCTT CTTCGTCATC GCAGAAGATG
GATTATTCTA CTTTCCTAGA CAATGTTCGT GATGGACAAG TCGCCAGCGT TGAAGTGAAA
AGTGACCAAC GTACTATCGA AGGTTCTAAG CGCACTGGCG AAAAATTCAC GACCATCATG
CCACTGTATG ACCAAGATTT AATTAATGAT CTTGACCGTA AAGGCATCAC CATGAAAGGC
CAAGAAGCCG AAGAATCGGG GTTCTTAACC CAGATCTTTA TTTCTTGGTT CCCAATGTTG
CTGCTGATTG GGGTATGGAT TTTCTTTATG CGCCAGATGC AGGGCGGCGG TGGCAAAGGC
GCTATGTCCT TTGGCAAGAG CAAAGCCAAG CTGATGAGCG AAGACCAAAT CAAGACCACT
TTTGCTGACG TTGCTGGCTG TGATGAAGCC AAAGAAGAAG TGAAAGAGCT GGTCGATTAT
CTGCGTGATC CAACCAAATT CCAAAAACTG GGTGGCCGTA TTCCAACGGG CGTGCTCATG
GTTGGCCCTC CAGGTACAGG TAAAACCTTA CTGGCTAAAG CGATTGCGGG CGAGTCAAAG
GTACCTTTCT TTACCATTTC GGGTTCTGAC TTCGTCGAAA TGTTCGTCGG TGTCGGTGCA
TCTCGCGTGC GTGACATGTT CGAACAAGCG AAAAAATCAG CCCCTTGTAT TATCTTCATC
GACGAAATCG ATGCCGTAGG TCGCCAACGT GGCGCAGGCT TAGGTGGTGG TCACGATGAG
CGTGAGCAAA CCCTTAACCA AATGCTGGTT GAGATGGACG GCTTCGAAGG TAACGAAGGG
ATTATCGTGA TTGCGGCGAC TAACCGCCCA GACGTTTTGG ACTCTGCGCT GCTGCGTCCA
GGTCGTTTCG ACCGTCAAGT GGTTGTAGGT CTGCCGGACG TTCGCGGTCG TGAGCAAATC
CTTAAAGTGC ATATGCGTAA AGTGCCGCTT TCTGAAGATG TGAAAGCAAG CGTAATTGCT
CGTGGTACGC CAGGTTTCTC CGGTGCCGAT TTAGCCAACT TAGTCAACGA AGCTGCACTG
TTTGCGGCGC GCGGTAATCG CCGTGTTGTC GGTATGGAAG AATTCGAGCG TGCAAAAGAC
AAGATCATGA TGGGTGCTGA GCGCCGCTCT ATGGTGATGT CGGAAGCCGA GAAAGAAATG
ACGGCATACC ACGAAGCGGG CCACGCGATT GTGGGCTGTT TAGTGCCAGA ACATGACCCT
GTGCACAAGG TAACCATTAT CCCACGTGGT CGTGCGCTGG GTGTGACCTT CTTCTTGCCT
GAGGCCGATG CGATTAGCCA AAGCCGTCGT AAGTTAGAAA GCCAGATTTC GGTTGCCTAC
GGTGGTCGTT TAGCCGAAGA GCTGATCTAC GGCAGCGAAA AAGTGTCTAC AGGCGCTTCG
CAAGATATTA AATACGCGAC ATCGATTGCC CGTAACATGG TGACCCAATG GGGCTTCTCC
GACAAACTCG GTCCATTACT CTATGCCGAG GAAGAAGGTG AAGTGTTCTT AGGCCGTAGC
ATGGGTAAAG CCAAGGCAAT GTCCGATGAA ACCGCGACGC TTATCGATGC CGAGGTGAAG
GCCTTTATCG ATAAAAACTA CGGTCGTGCC AAGCAAATTC TGCTGGATAA CATCGATATT
CTGCATTCGA TGAAAGACGC GCTGATGAAG TACGAAACCA TTGATTCACT GCAAATTGAC
GATTTGATGA ATCGCCGTGA AGTGCGTCAG CCTGCCGATT GGCAAGCGGA TGATAATGGT
TCAAACGACA AAGGCAGTGA CAAAGGCGAG CCTGCGGTTA AAGTCGACGA AGTGGTAAAG
ACCGCTCCCG TTGAGACAGA GCTTAAAGAT GCCGATGAGT CACCCGTTAA GTAA
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| Protein sequence | MRSSNLSDMA KNLILWVVIA VVLMSVFQGY SPSSSSSQKM DYSTFLDNVR DGQVASVEVK
SDQRTIEGSK RTGEKFTTIM PLYDQDLIND LDRKGITMKG QEAEESGFLT QIFISWFPML
LLIGVWIFFM RQMQGGGGKG AMSFGKSKAK LMSEDQIKTT FADVAGCDEA KEEVKELVDY
LRDPTKFQKL GGRIPTGVLM VGPPGTGKTL LAKAIAGESK VPFFTISGSD FVEMFVGVGA
SRVRDMFEQA KKSAPCIIFI DEIDAVGRQR GAGLGGGHDE REQTLNQMLV EMDGFEGNEG
IIVIAATNRP DVLDSALLRP GRFDRQVVVG LPDVRGREQI LKVHMRKVPL SEDVKASVIA
RGTPGFSGAD LANLVNEAAL FAARGNRRVV GMEEFERAKD KIMMGAERRS MVMSEAEKEM
TAYHEAGHAI VGCLVPEHDP VHKVTIIPRG RALGVTFFLP EADAISQSRR KLESQISVAY
GGRLAEELIY GSEKVSTGAS QDIKYATSIA RNMVTQWGFS DKLGPLLYAE EEGEVFLGRS
MGKAKAMSDE TATLIDAEVK AFIDKNYGRA KQILLDNIDI LHSMKDALMK YETIDSLQID
DLMNRREVRQ PADWQADDNG SNDKGSDKGE PAVKVDEVVK TAPVETELKD ADESPVK
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