| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1053 |
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| Symbol | |
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| ID | 4255529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1217106 |
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| End bp | 1217948 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638121665 |
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| Product | rare lipoprotein A |
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| Protein accession | YP_737109 |
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| Protein GI | 114046559 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0797] Lipoproteins |
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| TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000568388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00641376 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGCTAA GAAATAATCT TTTACCGCTC TTGATGCTCG GCTGCTGTTT TGCGCTTGCG
GCCTGCTCGA GTTCTAATTC TGGCTCGGCC AGCGAGAAGA ACAAGAACAT GGATCCCAAC
AAGGGCCGCT ATGCGCTAAA AAACGATAAG ATACCCATCA ATCCACCCAA TGTGGACCAT
GTGCCAAACG CGACCCCAAA ATACGAGCCC TACAGCCGTC GCGGTAATAA ACCTTACACG
GTTTATGGTG AGTCCTATAC GGTGTTAGAT TCGGGACAAG GCTTTTCCGA AACTGGCCGA
GCCTCGTGGT ACGGCGAGAA ATTCCACGGC TATGAGACAT CGAATGGCGA GCCCTACGAC
ATGTATGGCA TGTCTGGGGC ACACAAGACC TTGCCTTTGC CAAGCTATGC TCGCGTCACT
AACTTAGATA ACAATAAGCA GGTCATTATT CGGATTAACG ATCGCGGTCC TTTCCATTCG
GACCGGATTT TGGACTTATC CTACGCCGCC GCTTATAAGC TAGGCATGTT AGGCACAGGT
ACCGCGCGGA TTAAGCTGGA TGTGATCTAT ATTGGCACCC AAGCCGCGAC ACAGTCCGCC
ATAGCCAGTA TTCAATCCTC AGGCAATCAC TACATACAAT TGGTGGCTTC GAAGGATCAG
CATAGGCTGA ACAAAATGGC GAAGGATCTG GAGAAGAAAT ATCAGGTCAA GACCCGTGTA
CAACCGGCAA ACAATATGTA TAGACTACAG CTCGGTCCAA TTGGCCAAAC CGAACTAGCC
GACCGATTAC TCAATAAAGT GAAACAAGAT GGTTACCCCG AAGGCTATAT GGTTTTGGAG
TAG
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| Protein sequence | MTLRNNLLPL LMLGCCFALA ACSSSNSGSA SEKNKNMDPN KGRYALKNDK IPINPPNVDH
VPNATPKYEP YSRRGNKPYT VYGESYTVLD SGQGFSETGR ASWYGEKFHG YETSNGEPYD
MYGMSGAHKT LPLPSYARVT NLDNNKQVII RINDRGPFHS DRILDLSYAA AYKLGMLGTG
TARIKLDVIY IGTQAATQSA IASIQSSGNH YIQLVASKDQ HRLNKMAKDL EKKYQVKTRV
QPANNMYRLQ LGPIGQTELA DRLLNKVKQD GYPEGYMVLE
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