Gene Shewmr7_1045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1045 
Symbol 
ID4255521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1210471 
End bp1211676 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content50% 
IMG OID638121657 
Producthypothetical protein 
Protein accessionYP_737101 
Protein GI114046551 
COG category[S] Function unknown 
COG ID[COG3503] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0062609 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATTCTA ATACCACAGT GACACCCGCC GCTTCGCCTG AGACGCCTCA GCCGCAAGGG 
CGTCAGCGGA TCAATAGCAT CGACATGATG CGTGGCTTCG TGATGCTGAT TATGTTGCTC
GACCATGTAC GGGAGCGGTT TTTCCTGCAT ATGCAGGTGA GCGATCCTAT GGATTTGAGC
ACAACCAACT GGGCGCTTTT TGTCAGCCGT TTTGCGGCGC ACTTTTGTGC GCCTGTGTTC
GTCTTTTTAA CCGGGGTCTC GGCTTGGCTT TACGCCAATC GCGGTCATGG CGAGCCGCGC
TCTGCGCGCG AGTTTTTAAT CAAGCGCGGA CTATTCTTAA TCGCCCTCGA GGTGCTGGTG
ATAAATTTCT CATGGATGGG CAATTATCAC ACCCTGTGGT TACAGGTGAT TTGGGTGATA
GGACTGAGCA TGTTGGCCCT TGCGGCATTA ATCAAGCTCC CGAGGTTGTG GATGGCATTA
CTCGGGCTAT TGATTATCTT TGGCCATAAC CTATTGTCGC CTATTCATTT TACGCCAGAC
GATTGGGGTT ATAGTCTGTG GACGATATTA CATGACCGAG GTTATTTGAT TGCCGAGGGC
GAGCTTAAGC TGAAGATAAG TTACCCAGCG CTACCATGGA TTGGCGTGAT TTTATTGGGC
TATGTAGCAG GCCCCGTCTT TGGCCGAGGG GGAGACGCGT GGCAGCGTCA GCAGAAATTA
ATACTGCTAG GGCTTGGTTG CGTCCTGCTA TTTGGCTTGC TGCGTGGATT CAATCTCTAC
GGCGAGACGT TGCCTTGGCA GTTTGGCGAT ACTCTAAGCC AAACTTTAAT GTCGGTATTC
AATCTAACTA AGTATCCGCC ATCACTGAGT TTTTTGTTGG TGACCTTGGG CGGGATGTTC
TATGGCCTAG TAGTGTTTGA GCGCTATTTT GCGATAGGCA GAGTATTAGG TTGGATGGGG
CAGAGGTTAG CAGTGTTTGG TTCAGTGCCT ATGTTCTTCT ATATCTTGCA CTTATATGTA
CTGCTGTTGC TGTATTCGCT GGCTAAATGG GTATTTGGCG CAAACCATGG CGAGCTGTTT
GGCGTAGCGC ATATGGGGTG GGTATGGCTG ATAAGCTTAA TCTTGATCCC TTTACTCTAT
TATCCCGTGC GCTGGTTTAG CCGTTACAAA GGACTGAGTC AGCAGGCTTG GCTTAAGTAT
CTCTAA
 
Protein sequence
MNSNTTVTPA ASPETPQPQG RQRINSIDMM RGFVMLIMLL DHVRERFFLH MQVSDPMDLS 
TTNWALFVSR FAAHFCAPVF VFLTGVSAWL YANRGHGEPR SAREFLIKRG LFLIALEVLV
INFSWMGNYH TLWLQVIWVI GLSMLALAAL IKLPRLWMAL LGLLIIFGHN LLSPIHFTPD
DWGYSLWTIL HDRGYLIAEG ELKLKISYPA LPWIGVILLG YVAGPVFGRG GDAWQRQQKL
ILLGLGCVLL FGLLRGFNLY GETLPWQFGD TLSQTLMSVF NLTKYPPSLS FLLVTLGGMF
YGLVVFERYF AIGRVLGWMG QRLAVFGSVP MFFYILHLYV LLLLYSLAKW VFGANHGELF
GVAHMGWVWL ISLILIPLLY YPVRWFSRYK GLSQQAWLKY L