Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1045 |
Symbol | |
ID | 4255521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1210471 |
End bp | 1211676 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638121657 |
Product | hypothetical protein |
Protein accession | YP_737101 |
Protein GI | 114046551 |
COG category | [S] Function unknown |
COG ID | [COG3503] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0062609 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATTCTA ATACCACAGT GACACCCGCC GCTTCGCCTG AGACGCCTCA GCCGCAAGGG CGTCAGCGGA TCAATAGCAT CGACATGATG CGTGGCTTCG TGATGCTGAT TATGTTGCTC GACCATGTAC GGGAGCGGTT TTTCCTGCAT ATGCAGGTGA GCGATCCTAT GGATTTGAGC ACAACCAACT GGGCGCTTTT TGTCAGCCGT TTTGCGGCGC ACTTTTGTGC GCCTGTGTTC GTCTTTTTAA CCGGGGTCTC GGCTTGGCTT TACGCCAATC GCGGTCATGG CGAGCCGCGC TCTGCGCGCG AGTTTTTAAT CAAGCGCGGA CTATTCTTAA TCGCCCTCGA GGTGCTGGTG ATAAATTTCT CATGGATGGG CAATTATCAC ACCCTGTGGT TACAGGTGAT TTGGGTGATA GGACTGAGCA TGTTGGCCCT TGCGGCATTA ATCAAGCTCC CGAGGTTGTG GATGGCATTA CTCGGGCTAT TGATTATCTT TGGCCATAAC CTATTGTCGC CTATTCATTT TACGCCAGAC GATTGGGGTT ATAGTCTGTG GACGATATTA CATGACCGAG GTTATTTGAT TGCCGAGGGC GAGCTTAAGC TGAAGATAAG TTACCCAGCG CTACCATGGA TTGGCGTGAT TTTATTGGGC TATGTAGCAG GCCCCGTCTT TGGCCGAGGG GGAGACGCGT GGCAGCGTCA GCAGAAATTA ATACTGCTAG GGCTTGGTTG CGTCCTGCTA TTTGGCTTGC TGCGTGGATT CAATCTCTAC GGCGAGACGT TGCCTTGGCA GTTTGGCGAT ACTCTAAGCC AAACTTTAAT GTCGGTATTC AATCTAACTA AGTATCCGCC ATCACTGAGT TTTTTGTTGG TGACCTTGGG CGGGATGTTC TATGGCCTAG TAGTGTTTGA GCGCTATTTT GCGATAGGCA GAGTATTAGG TTGGATGGGG CAGAGGTTAG CAGTGTTTGG TTCAGTGCCT ATGTTCTTCT ATATCTTGCA CTTATATGTA CTGCTGTTGC TGTATTCGCT GGCTAAATGG GTATTTGGCG CAAACCATGG CGAGCTGTTT GGCGTAGCGC ATATGGGGTG GGTATGGCTG ATAAGCTTAA TCTTGATCCC TTTACTCTAT TATCCCGTGC GCTGGTTTAG CCGTTACAAA GGACTGAGTC AGCAGGCTTG GCTTAAGTAT CTCTAA
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Protein sequence | MNSNTTVTPA ASPETPQPQG RQRINSIDMM RGFVMLIMLL DHVRERFFLH MQVSDPMDLS TTNWALFVSR FAAHFCAPVF VFLTGVSAWL YANRGHGEPR SAREFLIKRG LFLIALEVLV INFSWMGNYH TLWLQVIWVI GLSMLALAAL IKLPRLWMAL LGLLIIFGHN LLSPIHFTPD DWGYSLWTIL HDRGYLIAEG ELKLKISYPA LPWIGVILLG YVAGPVFGRG GDAWQRQQKL ILLGLGCVLL FGLLRGFNLY GETLPWQFGD TLSQTLMSVF NLTKYPPSLS FLLVTLGGMF YGLVVFERYF AIGRVLGWMG QRLAVFGSVP MFFYILHLYV LLLLYSLAKW VFGANHGELF GVAHMGWVWL ISLILIPLLY YPVRWFSRYK GLSQQAWLKY L
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