| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1044 |
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| Symbol | |
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| ID | 4255520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1208307 |
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| End bp | 1210481 |
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| Gene Length | 2175 bp |
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| Protein Length | 724 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638121656 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_737100 |
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| Protein GI | 114046550 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00225756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCTGTTTA TTTTTGGAGT GAAAATGGCT GTTTATGTGA GCCACAAGCG CTCGGCATTA
GTGCTGGGCG TGGCGTTATT GGCGTTGGAT GCAAGTGTTC CCCTATTGGC CGCCGAGGCG
GTGCAAACTG ATACCGCGGG ACTTAATGAC GACGATATCG AGCGTTTAAG CATTCATTAT
CGTCAGGCCT ACCGCGGCAA TGTGCCGGCG ACTGAGTTGC CCCAAGCGAT TACTGTGCTG
GATGAGCAAC TGATTAAAGA TACTGGGCTG ACGCGTTTTC AAGACTTATT GGATTATTCC
GCCAGTGTCG CGCGGCAAAA CAACGGTGGT GGGCTATGGG ATAGTTTTTC GTTACGGGGC
TTTCCTGGGA ATGAAAACAT GCCATCGGGC TATTTAATCA ATGGTTTTAA TGGTGGCCGA
GGCTTTAGCG GCCATAGAGA CCTATCGAAC GTGGCCTATG TGGAAATTCT CAAAGGCCCG
GGCTCGGCGC TTTATGGGCG CTCGGAGCCT GGCGGGACTG TGAATATTGT GACTAAAAAG
CCGCAGTATG AGGCGCAAGG CTATTTAAAA GCGTCTGCGG GGAGTTTCGA TCAATATCGG
TTGGAAGGGG ATTTTACCTC GGGGCTGACC GATACCTTGG CCTTTAGGAT CAATGGTGCT
TGGCAGGAGC ATGACAGTTT TCGCGATTAT GTGTTTAGTG ATAAAAAGAT TGTCACGCCA
TCGCTGCGCT GGCAATTGTC GGATAAGTCA TCGCTCCTGT ATGAGGTTGA ATATCTTAAG
CAAGAACAGT TATTTGACCG TGGTGTAGTG GTGCTCAATA ACGACTTTAA TACCGTGCCC
CGTTCGCGTT ACTTGGGCGA GCCCAACGAT GGGCCAACTA AAGTGGATGC GACTGGGCAT
CAGCTTACCT ATGAGTATGA ATTAAATGAG GATTGGTCGC TTACCGCAGG TTATAACTAT
CGCGATTCGA GTCTGAATGG CTACTCATCG GATGCCGAAT TAGCAAAGGG ACGTCAATCC
TTATATGACG ATGGCCGTAC TCTGACGCGG CAGCATCGCT ATCGAGATTA CGCTTCTGAA
GACCATTCAG TGCGTGCCGA ACTCAGCGGC CAGTTTGATA CTGGCAGCAT AAGACATAAT
CTGCTGCTCG GGACGGATGC CTATCATTAT CGACTGAAAA CGGGACTCTA CCGTTATCGA
GGCCAGAAGG GCGCCTATGC CATCGATATT TTGGCACCTC AATATGGCGC AGCTCAGCCA
GAGGTCAGTC TGCTGTATGA AAACCGAGAG ACTCAAGATG CCTGGGGCGC CTATTTACAG
GATCAATTGG AGTTAACCGA GCACTGGAAA TTGCATTTAG GGTTAAGGTT TGACCGTTAT
TCCCAAGAAA TCGCAGAGCA GGTCAACGCG AGTCTGTCGG ATCAAAGCGA TCACAGGGTC
AGCCCGAAAG TCGGATTAGT GTATCAATGG TCTGAGGCGT TAAGTGTTTA TGCCTCCTAT
TCGGAAGGCT TTTTACCGCT TTCAGGCACT GATTATGCGG GTAATCCCTT CGAGCCAGAG
GAGAGCAAAT CCGTCGAGTT AGGGGTTAAA TTCAACAGCA CTTGGTTTGA GTTACCCGTC
AATGGCAGTT TGGCTTGGTT TGATGCGCAA AAGAGCAATA TCTTGACCTC AGATCCAGTC
AATGTCGGCT TTTCGGCGAC CCTAGGTGAA GCCAAGAGCA CTGGGATTGA ATTGGATGTC
GAGGCCGAGT TGACCGAGAG CTTACAAGCG ACCTTGTCCT ATGCCTACCT GAATACCCGC
ACGGCGAACG ACAGCCTGAA TCTGGATTGG GGCGTGTTAA TTCCGGCGGG GAGTCCGCTG
GTCAATGTGC CAAAACACAC GGGCAGTATC ATTCTCAAGC AGGACTTAAA TGATCTATCT
ATCGACGGTC ATTTAGGGCT GAGTTGGCGT TATGTGGACT CACGCTTGGG CGATTCGGCC
GATCCTAGTT TTCAATTACC AAGTTATCAG TTACTTGGAA TGTTCTTTAC TACTCGGCTT
GGCGAAAACC TAAGTCTCGC GCTCAATGTC GATAACCTGC TGGATGAGCA CTATATCGCC
AGCAGTTATT CGGCGCTGTG GGCCATGCCG GGTGAGCCAC GTAACGTTAA AGTGAGTGTT
GGCTATGAAT TCTAA
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| Protein sequence | MLFIFGVKMA VYVSHKRSAL VLGVALLALD ASVPLLAAEA VQTDTAGLND DDIERLSIHY
RQAYRGNVPA TELPQAITVL DEQLIKDTGL TRFQDLLDYS ASVARQNNGG GLWDSFSLRG
FPGNENMPSG YLINGFNGGR GFSGHRDLSN VAYVEILKGP GSALYGRSEP GGTVNIVTKK
PQYEAQGYLK ASAGSFDQYR LEGDFTSGLT DTLAFRINGA WQEHDSFRDY VFSDKKIVTP
SLRWQLSDKS SLLYEVEYLK QEQLFDRGVV VLNNDFNTVP RSRYLGEPND GPTKVDATGH
QLTYEYELNE DWSLTAGYNY RDSSLNGYSS DAELAKGRQS LYDDGRTLTR QHRYRDYASE
DHSVRAELSG QFDTGSIRHN LLLGTDAYHY RLKTGLYRYR GQKGAYAIDI LAPQYGAAQP
EVSLLYENRE TQDAWGAYLQ DQLELTEHWK LHLGLRFDRY SQEIAEQVNA SLSDQSDHRV
SPKVGLVYQW SEALSVYASY SEGFLPLSGT DYAGNPFEPE ESKSVELGVK FNSTWFELPV
NGSLAWFDAQ KSNILTSDPV NVGFSATLGE AKSTGIELDV EAELTESLQA TLSYAYLNTR
TANDSLNLDW GVLIPAGSPL VNVPKHTGSI ILKQDLNDLS IDGHLGLSWR YVDSRLGDSA
DPSFQLPSYQ LLGMFFTTRL GENLSLALNV DNLLDEHYIA SSYSALWAMP GEPRNVKVSV
GYEF
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