| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1004 |
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| Symbol | carB |
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| ID | 4255690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1159161 |
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| End bp | 1162385 |
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| Gene Length | 3225 bp |
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| Protein Length | 1074 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638121615 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_737060 |
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| Protein GI | 114046510 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.777466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.846919 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAAC GTACAGATAT AAAGAGTATT CTTATCCTAG GTGCAGGCCC GATTGTCATT
GGTCAGGCGT GTGAGTTCGA CTATTCAGGC GCTCAAGCCT GTAAAGCCCT GCGTGAAGAA
GGTTACCGCG TCATTCTGGT GAACTCTAAC CCTGCCACCA TTATGACCGA CCCTGAAATG
GCCGATGCCA CTTATATCGA GCCAATCCAA TGGGAAGTGG TACGTAACAT TATCGCTAAA
GAACGTCCTG ATGCGATTCT GCCAACTATG GGCGGCCAAA CCGCGCTGAA CTGCGCCCTT
GAGCTTGAAG CTAAAGGCGT ACTGGCTGAA TTCAACGTTG AAATGATCGG TGCAACCGCC
GATGCGATTG ACAAAGCAGA AGACCGTAGC CGCTTCGACA AAGCCATGAA GAGCATTGGC
TTAGAGTGTC CACGCGCGGG CATCGCCCAC AGCATGGAAG AAGCCTATGG TGTACTCGAT
CTCGTTGGTT TCCCTTGTAT TATCCGTCCA TCATTCACTA TGGGTGGCTC GGGCGGTGGT
ATCGCCTACA ACAAGGAAGA GTTCGAAGAA ATCTGTTCTC AAGGTTTAGA TTTATCGCCA
ACCAAAGAGC TGCTCATCGA CGAGAGCTTA ATCGGTTGGA AAGAATACGA GATGGAAGTG
GTTCGTGACC GTAACGACAA CTGTATCATC GTGTGTTCTA TCGAAAACTT CGACCCAATG
GGCGTGCACA CTGGCGACTC TATTACCGTT GCCCCAGCAC AAACCCTGAC AGACAAAGAA
TACCAACTGA TGCGTAACGC CTCTATGGCG GTACTGCGTG AGATTGGTGT TGAAACCGGT
GGTTCGAACG TACAGTTTGG TATCAATCCG AAAGATGGCC GTATGGTTAT CATCGAGATG
AACCCACGCG TATCACGTTC ATCGGCACTG GCGTCTAAAG CGACAGGCTT CCCGATTGCG
AAAATCGCCG CCAAGTTAGC GGTCGGTTTC ACCCTCGATG AGCTGATGAA CGACATTACT
GGTGGCCGTA CGCCAGCGTC ATTCGAGCCA GCCATCGACT ACGTCGTGAC TAAAGTACCT
CGCTTTAACT TTGAAAAATT TGCCGGATCA AACGATCGCC TAACCACGCA GATGAAGTCA
GTGGGCGAAG TGATGGCAAT TGGCCGTACT TTCCAAGAGT CACTGCAAAA AGCCCTGCGC
GGTTTAGAAG TGAGCCGTCA CGGCTTTGAC CCAATCACTG ACTTAACCAA ACCCGATGCC
TTAGCGCGTA TTCGCCTCGA GCTGAAAGAG CCAGGCTGTG ACCGTATTTG GTACATCGCC
GACGCTATGC GTGCGGGGTT AACCCTGGAT GAAATTTTCC GTTTAACCAA CATCGACCCA
TGGTTCTTAG TCCAGATTGA AGAGCTGATT AAGCTGGAAG GCCAAGTGGC CGAAGGCGGT
TTAGCCGGTC TTAACGAAGA GCTGCTGCGT AAGCTTAAGC GTAAAGGCTT TGCCGATGCG
CGTCTGGCAG CGGTCCTTGG CGTAAACGAG ACTGAAGTCC GTAAACTGCG TGACCGTTTC
GATATCCACC CAGTTTACAA GCGCGTAGAT ACCTGCGCGG CTGAATTTGC CACCGACACC
GCTTACATGT ACTCAACCTA TGAGGAAGAG TGTGAAGCGA ATCCATCTGA CCGTGAGAAA
ATCATGGTGT TAGGTGGTGG TCCAAACCGT ATCGGTCAAG GTATCGAATT CGATTACTGC
TGTGTGCACG CGGCATTAGC CCTACGTGAA GACGGTTATG AAACCATCAT GGTGAACTGT
AACCCTGAAA CCGTTTCTAC CGACTACGAC ACTTCAGATC GTCTGTACTT CGAGCCTGTT
ACTTTAGAAG ACGTGTTAGA AATCGTCCGT ATCGAGAAGC CAAAGGGCGT TATCGTGCAG
TACGGTGGTC AAACTCCGCT GAAACTGGCT CGCGCCCTTG AGGCGGCGGG TGTGCCAATT
ATTGGTACTA GCCCAGATGC GATTGACCGT GCTGAAGACC GTGAGCGTTT CCAGCAAGCG
ATTCAACGTC TGGAAATGAA GCAGCCTGAA AACGATACAG TCACCACCGT TGAAGGTGCT
GTGATTGCCG CCGAGCGTAT CGGTTATCCA TTAGTTGTTC GTCCATCCTA CGTACTGGGC
GGCCGCGCGA TGGAAATCGT TTACGACCAA CAGGATTTAC TGCGCTACTT CAACGAAGCG
GTAAGCGTAT CTAACGCTTC GCCAGTACTG TTAGACCACT TCCTAGACGA TGCTATCGAA
GTGGATATCG ACGCAGTATG TGACGGTGAA ACCGTAGTTA TCGGCGCGAT TATGGAGCAT
ATCGAGCAGG CGGGTGTTCA CTCAGGTGAC TCTGGCTGTT CGCTGCCTCC TTACACCTTA
AGCCAAGCTA TCCAAGACGA AATGCGCGTG CAAGTGCGTA AGTTGGCGAT GGAGCTGGGT
GTTGTCGGTC TGATGAACGT ACAGTTTGCC GTGAAGAATA ACGAAATCTA CATGATTGAA
GTTAACCCAC GTGCAGCGCG TACCGTGCCA TTCGTATCGA AAGCGACAGG CGTGCCGTTA
GCTAAGATTG CCGCCCGTGT GATGGCTGGT CAAAGCTTGA AGGCGCAAAA CTTTACTGAA
GAAGTGATCC CACCTTTCTA CTCAGTGAAA GAAGTGGTAC TGCCATTTAA CAAGTTCCCT
GGCGTTGACC CACTGTTAGG CCCAGAAATG CGCTCAACAG GTGAGGTGAT GGGCGTGGGC
GATACCTTCG CCGAAGCCTA TGCTAAGGCG CAGTTAGGTG CGACTTCTGA AGTGCCTAAG
TCTGGTCGTG CTCTCTTGTC TGTGCGTAAC AGCGACAAGA AACGTGTTGC CGACTTAGCC
GCTAAGTTGA TTGAGCTGGG TTATCAAATC GATGCCACCC ACGGTACTGC GGTTATCCTA
GGTGAAGCGG GTATCAACCC ACGCTTAGTG AACAAGGTAC ACGAAGGCCG TCCACACATT
CTTGACCGCA TCAAGAACGG TGAATACACC TATATAGTGA ACACCACCGA AGGCCGTCAA
GCGATTGAAG ACTCTCGTCA ATTACGTCGC GGTGCACTGC GTTACAAAGT GAACTACACC
ACGACCATGA ACGCAGCATT CGCCACTTGT ATGGCACACG CTGCGGACGA CCGCACTAAC
GTGACGTCAG TGCAAGAGCT GCATCAGCGC GTATTGGCAA AATAA
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| Protein sequence | MPKRTDIKSI LILGAGPIVI GQACEFDYSG AQACKALREE GYRVILVNSN PATIMTDPEM
ADATYIEPIQ WEVVRNIIAK ERPDAILPTM GGQTALNCAL ELEAKGVLAE FNVEMIGATA
DAIDKAEDRS RFDKAMKSIG LECPRAGIAH SMEEAYGVLD LVGFPCIIRP SFTMGGSGGG
IAYNKEEFEE ICSQGLDLSP TKELLIDESL IGWKEYEMEV VRDRNDNCII VCSIENFDPM
GVHTGDSITV APAQTLTDKE YQLMRNASMA VLREIGVETG GSNVQFGINP KDGRMVIIEM
NPRVSRSSAL ASKATGFPIA KIAAKLAVGF TLDELMNDIT GGRTPASFEP AIDYVVTKVP
RFNFEKFAGS NDRLTTQMKS VGEVMAIGRT FQESLQKALR GLEVSRHGFD PITDLTKPDA
LARIRLELKE PGCDRIWYIA DAMRAGLTLD EIFRLTNIDP WFLVQIEELI KLEGQVAEGG
LAGLNEELLR KLKRKGFADA RLAAVLGVNE TEVRKLRDRF DIHPVYKRVD TCAAEFATDT
AYMYSTYEEE CEANPSDREK IMVLGGGPNR IGQGIEFDYC CVHAALALRE DGYETIMVNC
NPETVSTDYD TSDRLYFEPV TLEDVLEIVR IEKPKGVIVQ YGGQTPLKLA RALEAAGVPI
IGTSPDAIDR AEDRERFQQA IQRLEMKQPE NDTVTTVEGA VIAAERIGYP LVVRPSYVLG
GRAMEIVYDQ QDLLRYFNEA VSVSNASPVL LDHFLDDAIE VDIDAVCDGE TVVIGAIMEH
IEQAGVHSGD SGCSLPPYTL SQAIQDEMRV QVRKLAMELG VVGLMNVQFA VKNNEIYMIE
VNPRAARTVP FVSKATGVPL AKIAARVMAG QSLKAQNFTE EVIPPFYSVK EVVLPFNKFP
GVDPLLGPEM RSTGEVMGVG DTFAEAYAKA QLGATSEVPK SGRALLSVRN SDKKRVADLA
AKLIELGYQI DATHGTAVIL GEAGINPRLV NKVHEGRPHI LDRIKNGEYT YIVNTTEGRQ
AIEDSRQLRR GALRYKVNYT TTMNAAFATC MAHAADDRTN VTSVQELHQR VLAK
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