Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1002 |
Symbol | |
ID | 4255302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1156994 |
End bp | 1157806 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638121613 |
Product | dihydrodipicolinate reductase |
Protein accession | YP_737058 |
Protein GI | 114046508 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0289] Dihydrodipicolinate reductase |
TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00177557 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.985837 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGGAC AAGTGAGAGT TGCAATTGTC GGTGCGGGTG GACGCATGGG ACGGACTCTT ATTGAATCGG CTTATCATCA AGAGCACATT CGCTTAGGTG CCGCCATCGA GCGTCCTGGT TCAAGCTTAG TTGGCGTGGA TGCGGGCGAG CTGGCGGGTG TGGGCAAGTT AAATGTCCTA GTGATGGATT CGCTCGACTA TGCGACCGAT GACTTTGATG TGTTGATTGA TTTTACTGCG CCAGAGGCCA GTATTGTCCA TTTAGACTGG TGTGTGCGCC ATAAGAAAGC CATGGTAATT GGCACAACCG GTTTCAATCA TGCTCAAAAA GAACAGATCA ATGCCTTTGC CGAGCAAACG CCGGTAGTGA TGGCGCCGAA TATGTCTGTG GGTGTCAATC TGATGTGGAA ATTGCTCGAA CTGGCCGCTG AGGTCATGGG CGATTACACC GATATCGAAA TTATCGAAGG TCACCACAGA CATAAAAAAG ACGCGCCATC TGGCACTGCG CTAAAAATGG GTGAAGTCAT CGCTAAGACC TTAGGTCGCG ATCTCGAAAA ATGCGCAGTC TATGGCCGCG AAGGGATCAC TGGCGAGCGT GACCGTGAAA CCATAGGTTT TGCGACTGTG CGCGCGGGCG ACTTAGTCGG TGAGCATACC GCCATGTTTG CCGATATCGG TGAGCGTTTA GAGATCACTC ATAAAGCCTC TAGTCGTATG ACCTTTGCTA ACGGCGCTAT GCGTGCCGCC CATTGGTTAG TGGAGCAAAA ACCGGGTCTG TATGACATGC AGCAGGTATT AGGTTTGAAT TAA
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Protein sequence | MGGQVRVAIV GAGGRMGRTL IESAYHQEHI RLGAAIERPG SSLVGVDAGE LAGVGKLNVL VMDSLDYATD DFDVLIDFTA PEASIVHLDW CVRHKKAMVI GTTGFNHAQK EQINAFAEQT PVVMAPNMSV GVNLMWKLLE LAAEVMGDYT DIEIIEGHHR HKKDAPSGTA LKMGEVIAKT LGRDLEKCAV YGREGITGER DRETIGFATV RAGDLVGEHT AMFADIGERL EITHKASSRM TFANGAMRAA HWLVEQKPGL YDMQQVLGLN
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