| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0988 |
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| Symbol | |
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| ID | 4255288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1138526 |
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| End bp | 1140721 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638121599 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_737044 |
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| Protein GI | 114046494 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00021194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.772446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATGC GTTTTAATCT ACTTCCACTT GCTGCTGCAG TAACCCTAGC TTTGAATCCT
TTGGCGCTGA TGGCCGAAGA ACAAACCGCT TCAACAACAG AGACACAAGA TCAAAATATC
GAAAAAATCA CTGTGATGGG TAAATACACA GTGAGTCGTA ATATTGATAC CGCAACGGGG
TTAGGACTCA CGTTGCGGGA AACGCCACAG TCGGTCAGCA TTATGACGGC GGATCGGATT
GAAGATCAGG CGCTAAATAC CGTGGTCGAT GTGGTCAACA ACACTGTGGG TTTATCATCT
TCAAAAACCG ATAACGTGCG TAACGGTTTT TCGGCTCGCG GTTTTACCGT GCAAAACTAT
CAAATTGATG GCGTGCCTTT ATCTTGGAGT TTAGGTGGTG ATGCCGGTGA AACGGTATCG
GATGTGTCTA TCTACGAGCG CGTTGAAGTC GTGCGTGGTG CTACCGGATT ATTAACAGGT
GCTGGCGATC CTTCGGCCTC AATTAACTTA GTGCGTAAGC ATGCCGACAG TTCTGATCTT
AAAGGTTATG TCGATGTTGC CACTGGAAGT TGGGATAAAA AACAAGTCAC CGCGGATGTG
TCTAATGGTC TGAATGAAGA CGGCAGCGTG CGTGGGCGCT TGGTCGCTAA GTATGTGAAT
AGCGATTCTT ACCAAGATCT GTATCAAGAC CGCAAAACCA TTCTCTATGG TGTGGTCGAC
AGTGATATTA CGGCCAACAC CTTGCTGCGT GTTGGTGGTA GCTATAACCA CAACGATCCC
AAAGGGGCGA TGTGGGGCGC GTTGCCCGCC GTCTTTAGTG ATGGTTCTGC CACAGATTGG
GATACATCGG CCACCACTGC CGCCGATTGG AGCCGCTGGG AAACCAAAAA CATCAACTAC
TTTGCGAACC TTAATCACTA CTTCAGCAAT GGTTGGCAGC TCGTCGCTAA CTACAACCGC
ATGGGGTATG AGACCACTAC TAAGATGATA TACATGTCGG GTATGCTCGA TAAAGACACG
GGGGCGGGAC TCAGTGGACA GCGTTATCAC AGCCATGGCG AAAGTAACTC GAATAACTTT
GATGTGCAGC TTAAAGGCGA CTATGACCTC TTTGGCCAAA CCCATGAGTT TGTGACGGGC
GCTATGTATA GTAAGCAAAA ATCCTACGCC GATACCTACG AGCCTATCCG TGACGATATG
ACGGGTTGGG ACTCACAAGT GGTGGATAAC TTCTACGAAT GGCAACAAAA TCAGTTTGCT
GAGCCAGAGT GGTCGAGCAA CGCGAACCGT CAGCTCAATA TGGATACCGA GCAAAAAGGC
TTTTATGCGG CGACTCGCTT AACGATTACC GATGATTTTA AATTGATTGC TGGTGGACGT
ATCTCAAGCT GGAATCGTGA AGGCGTGAGC TATGGTACCG ATACTAACTT TGGTGATGAT
GGGGTGTTTG TGCCCTACGT TGGCGCCTTG TACGATATCA ATGACGCGCA CCGTATTTAC
GCCAGTTATA CCGGGATTTT TAACCCGCAG AATAAACAGG ATGCTAGTGG CGATTATCTT
GACCCATTAG AGGGGAAAGC ATATGAGATT GGATTAAAAA GTGCGTATTT AGATGACCGT
CTACATACAT CGTTAGCATT GTTTAAAATC GAGCAGGATA ACTTTGGTAA ACAAGATCCG
GACTTTGTAC CGACTGAAGA GCAAATCGCC AACGGCCAAA CGACCGCATA CTATGCTATC
CAAGGTACGG AAAGTAAGGG CTTCGAGTTA GAAGTTGTTG GGGAGTTTAT CGACGGTTGG
AATATTTCAG CGGGCTATTC ACAATTTAAA GCCGAAGATG CTGAAGGAAA TAAGTTGGAT
ACAACCAGTC CACGTAAGCA ATTTAAACTG TTTACTACCT ATCAATTTGT GGATCTATTG
CCAGAGTTAA CCATTGGTGG TGGAGTGAAT TGGCAAAGTG ATAGTTATTC TACAGGTGGC
AATGTCACTA TCACGCAGGA TGCCTATTCT TTGGTGAATC TAATGGCGCG CTACGATCTG
GCTGAAAATA TGGATTTGCA GTTTAACCTC GAGAATCTGC TGGATGAGAA ATATTACGCC
TATATGTCAA CCTCTAGTTA TTTGCCGGAA GCTTACAGCG TGTATCACTA CGGCGCGCCA
CGTAACTTTA CCGTCAGCTT TAACTATCGT TTTTAA
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| Protein sequence | MTMRFNLLPL AAAVTLALNP LALMAEEQTA STTETQDQNI EKITVMGKYT VSRNIDTATG
LGLTLRETPQ SVSIMTADRI EDQALNTVVD VVNNTVGLSS SKTDNVRNGF SARGFTVQNY
QIDGVPLSWS LGGDAGETVS DVSIYERVEV VRGATGLLTG AGDPSASINL VRKHADSSDL
KGYVDVATGS WDKKQVTADV SNGLNEDGSV RGRLVAKYVN SDSYQDLYQD RKTILYGVVD
SDITANTLLR VGGSYNHNDP KGAMWGALPA VFSDGSATDW DTSATTAADW SRWETKNINY
FANLNHYFSN GWQLVANYNR MGYETTTKMI YMSGMLDKDT GAGLSGQRYH SHGESNSNNF
DVQLKGDYDL FGQTHEFVTG AMYSKQKSYA DTYEPIRDDM TGWDSQVVDN FYEWQQNQFA
EPEWSSNANR QLNMDTEQKG FYAATRLTIT DDFKLIAGGR ISSWNREGVS YGTDTNFGDD
GVFVPYVGAL YDINDAHRIY ASYTGIFNPQ NKQDASGDYL DPLEGKAYEI GLKSAYLDDR
LHTSLALFKI EQDNFGKQDP DFVPTEEQIA NGQTTAYYAI QGTESKGFEL EVVGEFIDGW
NISAGYSQFK AEDAEGNKLD TTSPRKQFKL FTTYQFVDLL PELTIGGGVN WQSDSYSTGG
NVTITQDAYS LVNLMARYDL AENMDLQFNL ENLLDEKYYA YMSTSSYLPE AYSVYHYGAP
RNFTVSFNYR F
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