Gene Shewmr7_0985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0985 
Symbol 
ID4256532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1133124 
End bp1134203 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content51% 
IMG OID638121596 
ProductDNA polymerase IV 
Protein accessionYP_737041 
Protein GI114046491 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAAAAA TCATTCATAT CGATATGGAT TGCTATTTTG CTGCGGTGGA AATGCGGGAT 
TTTCCCGAAT ACCGCGGTAA ACCGCTGGCT GTCGGCGGCA GTCGGGTGCA GCGTGGCGTC
ATCAGCACTT GTAATTATGA GGCACGCAAA TTTGGTGTGC GTTCTGCCAT GGCGACGGGC
TACGCACTGA AATTGTGCCC CGATCTTATC CTCGTTCCCG GTCGTATGCA GGTCTACAAA
GAGGTCTCGC AGCAAATTCG TGCCATCTTT TCCCGATACA CTGAGCTAAT CGAACCGCTT
TCCCTCGATG AAGCCTATTT AGATGTCAGC GATTGTAAGC TGTTTAAGGG CTCTGCCACG
TTAATCGCCG AGGCGATTCG CCGTGATATT TTGGCCGAAA CTGGGCTGAC GGCATCGGCG
GGCGTGGCGC CGATTAAATT TCTCGCCAAG GTTGCCTCTG ATTTAAATAA GCCCAACGGG
CAATGTGTTA TCCCACCCGA TGAGGTTCCC GAGTTCGTTA AAAGCTTATC CCTGCGGAAA
ATACCCGGAG TCGGTAAAGT GACCGCTGAG AAACTATCTT CGCTAGGCTT AAATACCTGC
GCCGATGTGC AGGCTTATCC AAAGCAAGAG TTGATTGCCC GTTTTGGTAA GTTTGGCGCC
GTGTTAGTCG AGCGGGCCCA TGGCATCGAT GATCGTGGGA TTTCTGTGAG CCGCGAGCGC
AAATCTGTGG GCGTTGAGAC CACACTCGCT CAGGATATTT ACACGCTGGA GCAGTGCCAG
CAAGTGATGC CGGGATTAAT CCAAGAGTTG TCCAGCCGTT TAGGGCGAAG CGCTAAGGGA
AGGCAAATCC ATAAGCAGGT GGTCAAACTT AAATTTAATG ACTTTAAACA GACCACCATC
GAGCATCGTA GTGACGAGGT CTCCGTGGTG ATGTTTTATG AGCTACTGAG CCAAGCAATG
GCTAGGCAAG AGGGACGTGG AATTCGGTTA CTCGGGGTTT CTGTTGGACT CGCCGAGAGT
AAAGACACGC TTGCGCCGCT CATGGTACGC GAAACTAAGC AGTTGGATTT TGTGTTTTAG
 
Protein sequence
MRKIIHIDMD CYFAAVEMRD FPEYRGKPLA VGGSRVQRGV ISTCNYEARK FGVRSAMATG 
YALKLCPDLI LVPGRMQVYK EVSQQIRAIF SRYTELIEPL SLDEAYLDVS DCKLFKGSAT
LIAEAIRRDI LAETGLTASA GVAPIKFLAK VASDLNKPNG QCVIPPDEVP EFVKSLSLRK
IPGVGKVTAE KLSSLGLNTC ADVQAYPKQE LIARFGKFGA VLVERAHGID DRGISVSRER
KSVGVETTLA QDIYTLEQCQ QVMPGLIQEL SSRLGRSAKG RQIHKQVVKL KFNDFKQTTI
EHRSDEVSVV MFYELLSQAM ARQEGRGIRL LGVSVGLAES KDTLAPLMVR ETKQLDFVF