| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0971 |
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| Symbol | |
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| ID | 4256518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1117696 |
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| End bp | 1118811 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638121582 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_737027 |
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| Protein GI | 114046477 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000651502 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTATT TGGGGAGCCT ATTGCTTGCG GCATTACTGA TTGGACTCGG TGGGTGTAAT
CCTGCGCCTT CACAGACCGA ACAGATTTCC GCATCGCCCC ATCCTGACTC GGCTCCCTCC
AAAGAGGTGA TTGAGTGGCG CTTAGCCACG TCGTGGCCGA AAAACTTCGC TGGTTTAGGC
ATGGCGCCTG AGCGTTTTGC TAAGCTGGTG AACGAGATGT CCCATGGCCG GTTGCAGATT
AAAGTTTACG GCGCAGGGGA GTTAATGCCC GCCTTTGCGG TATTCGACGG CGTCAGCCAA
GGTAAAGTGC AAATGGCCCA CGCCGCCTCC TATTATTGGA AGGGCAAAGC GCCTGCCTCA
CAGTTTTTTT CTTCTATTCC CTTTGGGATG ACGGCCCAAG AGATGAATGG CTGGCTGCAT
TATGGTGGCG GGATGGCGCT GTGGGAGGAA GTCTATCGTC CCTTTGGCAT TATCCCAATA
GCGGGTGGCA ATACGGGAAT GCAGATGGGG GGCTGGTTTA ATAAACCCAT CAACACTATT
GCCGACTTTA AAGGCTTAAA GATCCGTATG CCAGGTTTGG GTGGCGAAGT GCTGAAACGT
GTCGGTGCCG TTCCGGTTAA TATGGCGGGC AGGGAGCTTT ATGGCGCTTT GCAAACGGGC
TCGATTGATG CGGCAGAATG GGTTGGGCCA GTGAATGACC TTGCCTTTGG CTTACATAAA
GTCGCCAAAT ATTACTATTA TCCCGGTTGG CATGAGCCAG GCTCCAATAT GGAGTTCTTG
ATCAATAAAG CCGCCTTTGA GAGTCTGCCC GAAGATTTAC AGGCCATAGT CAAAGGCGCG
GCGCGTGCTA TCAATCAAGA TATGTTGGAC GAATACACCA CGCGTAACGT GACAGCCCTT
GAAACCTTAG TAAAAGACGA AGGTGTGGTG CTGAAGGCAT TCCCGCCCGA GGTGCTTAGC
GAGCTTGAAC GTATTTCACA GCAGGTCATT GAAGAGCAAG CGGAGCAGGA CCCTATGATG
CGCAAAGTGT ATCGTGCCTA TCATGCCTAT GAACAAGGTG TACGTGAGTA TCATAAGATT
TCAGAGGATG CTTACAGCCA GCAGCGTCAG CATTAA
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| Protein sequence | MRYLGSLLLA ALLIGLGGCN PAPSQTEQIS ASPHPDSAPS KEVIEWRLAT SWPKNFAGLG
MAPERFAKLV NEMSHGRLQI KVYGAGELMP AFAVFDGVSQ GKVQMAHAAS YYWKGKAPAS
QFFSSIPFGM TAQEMNGWLH YGGGMALWEE VYRPFGIIPI AGGNTGMQMG GWFNKPINTI
ADFKGLKIRM PGLGGEVLKR VGAVPVNMAG RELYGALQTG SIDAAEWVGP VNDLAFGLHK
VAKYYYYPGW HEPGSNMEFL INKAAFESLP EDLQAIVKGA ARAINQDMLD EYTTRNVTAL
ETLVKDEGVV LKAFPPEVLS ELERISQQVI EEQAEQDPMM RKVYRAYHAY EQGVREYHKI
SEDAYSQQRQ H
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