Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0969 |
Symbol | |
ID | 4256516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1116376 |
End bp | 1117035 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638121580 |
Product | DNA-N1-methyladenine dioxygenase |
Protein accession | YP_737025 |
Protein GI | 114046475 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3145] Alkylated DNA repair protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0395263 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAAG TCGATTTAGG ACTCGAGCCT GAGGTCAATC TTGAAGCTGC TGGAGGGAGC TCTCGTGCCT ATAGTCAAGA TGCGGCACAG GTCGAGCCGC CTATCACCTT AATTAGGGAT TATTTGAATG TGGCGCAGCA ACATGCCTTA CTCAAGGAGG CCGAGTCTTA CCCGCTGAGT CGCCCACAAA TTCAAGTGTT TGGAGAATAT CATTCGATCC CAAGGCAGCA GGTTTGGTTT GGCGATGCGG GATGTGACTA TTTATATTCT GGGCTATTTA TTCGTGCCAT TCCTTGGCCT AAGTATTTGC AAAAATTGCG CGATAAATTG CAGCGGGATT TTGGCCTTGG CAGCAATGGT GTGTTAGTGA ATCGCTATGC CGATGGTCAG GATTGTATGG GCGCCCACAG CGATGATGAG CCCGAGATTG CGAGCGGCAG TGATATCGCC TCTATCAGCC TTGGCGCCTC GCGGGATTTT GTGATTAAAC ATAAACACAG CAAGGTGAAA TACACGATTA GCTTACACAG TGGTGACTTA CTGATTATGC ACTGGCCAAT GCAGCAAGAT TGGTTACACA GCGTGCCTAA GCGCTTAAAG GTTAAGGAAC CCCGCTGGAA CTACACCTTT AGGCAATTGA TTGTTAATTA TCATGGCTGA
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Protein sequence | MKQVDLGLEP EVNLEAAGGS SRAYSQDAAQ VEPPITLIRD YLNVAQQHAL LKEAESYPLS RPQIQVFGEY HSIPRQQVWF GDAGCDYLYS GLFIRAIPWP KYLQKLRDKL QRDFGLGSNG VLVNRYADGQ DCMGAHSDDE PEIASGSDIA SISLGASRDF VIKHKHSKVK YTISLHSGDL LIMHWPMQQD WLHSVPKRLK VKEPRWNYTF RQLIVNYHG
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