| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0956 |
|---|
| Symbol | |
|---|
| ID | 4255590 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 1098915 |
|---|
| End bp | 1099466 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638121567 |
|---|
| Product | FMN-binding domain-containing protein |
|---|
| Protein accession | YP_737012 |
|---|
| Protein GI | 114046462 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4659] Predicted NADH:ubiquinone oxidoreductase, subunit RnfG |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0275776 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.549187 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCATA CATATCTGAA TAGCTTGTGG TTTATGCCAA TGGTCATAGT TGCCGCCCCT
GCATTTTCTG CGGATTATTT AACAGTGGCC CAAGCGCAGG CGTTGATTTT TGATAAGGCA
GCGGTATTTA GTGAGCGTCC AACCTTACTG AGCTCCGATG CGAAAGATCA GATCAAAGAT
TTATCGGGCG TTCGCCAACG CCAAGATCAG CAGCCTATCT GGAAAGTTGA AAAAGACGGT
CAGTTTCTCG GTTGGTTTGT GGTGGATGAT GTTGTCGGTA AACATGAGTA TATTACCTAC
GCCATCGGCA TTAGTCCGCA GGGCGAAGTG CTCGGGTTAG AGGTGCTTAG TTATCGTGAA
ACCCACGGCG GCCAAGTGCG TGAAGCGAGT TGGCGCGATC AGTTCCACGG TAAAACCCTC
AAAGATCCCT TTAAACTCGA TGAAGATGTC AGCAATATTA GTGGGGCCAC ATTAAGTTGC
CGTAATTTAC TCGATGGCGT AAAACGGTTA CTTGTTATCC ATCAACTCTT TTTGTCGCAG
TCAGTCGCAT AG
|
|---|
| Protein sequence | MAHTYLNSLW FMPMVIVAAP AFSADYLTVA QAQALIFDKA AVFSERPTLL SSDAKDQIKD
LSGVRQRQDQ QPIWKVEKDG QFLGWFVVDD VVGKHEYITY AIGISPQGEV LGLEVLSYRE
THGGQVREAS WRDQFHGKTL KDPFKLDEDV SNISGATLSC RNLLDGVKRL LVIHQLFLSQ
SVA
|
|---|
| |