| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0954 |
|---|
| Symbol | |
|---|
| ID | 4255588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 1096041 |
|---|
| End bp | 1097378 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638121565 |
|---|
| Product | Na+/H+ antiporter NhaC |
|---|
| Protein accession | YP_737010 |
|---|
| Protein GI | 114046460 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1757] Na+/H+ antiporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0132294 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.214654 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGTCAAT CAGCCCAAAC CACTGCACCG AGTAGCCCGG CATCCTTTAT TGCCCTGTTA
CCCTTATTCG TTTTTCTAAG TCTGTTTATT GGCGCAGGCG TCTATTTCCA AAGCCAAGGT
GTGGACTTTG CCTTCTATCA ATTACCGAGT GTGATTGCCA TTCTGCCAGC CATTATTCTG
GCCTTGGTAT TATCAAAACA AAAACTCAAT CAAGCGATTG ATACCTTTAT CGGCGGTATT
GGACACAGCA ATATTATTGC TATGTGTTTG ATTTACTTGT TGGCTGGCGG TTTTGCTGCG
GTCGCGAAAG CCACAGGCGG TGTCGATGCG ACCGTTGCCT TAGGTTTATC GCTTATTCCT
TCAAACCTAT TACTGCCCGG CTTTTTCGTG ATTGCCGCCT TTATTGCCAC CGCAATGGGT
ACCTCTATGG GCACCATCGC CGCCGTGGCA CCTATCGCCT TAGGCGTTGC CGATCAGGCA
CAAATTGATT ATGCCCTGAT GGCGGGCGCC GTGATGTCTG GCGCACTGTT TGGCGATAAC
CTCTCGATTA TTTCGGATAC CACTATTGCT GCCACTCGTA CTCAAGGCTG TGATATGAAA
GATAAATTCC GTGAGAACCT GATTTTTGCT ATCCCGGCTT CACTACTGAC CTTTATCGCC
TTTGTGATTG CAGGCCAAGG CCAAGCCGAT CTAGCCGCTC AAGAAATTGA CTTTATTAAG
GTGATTCCTT ACCTGACGAT TCTGGTATTA GCGGTCGCAG GGTTAAACGT GTTCGTCGTC
TTGACCTTAG GCATTCTGCT GGCGGGCGCT GCGGGATTCC TCACCATGGA CTATGGCGTT
ATCCAATTTG GTAAGGATAT CTACGCAGGC TTTAGCAATA TGCAGGAAAT CTTCATCCTG
TCGATGCTAG TCGGTGGTTT AGCCGCGCTG ATGCAACAAC AAGGGGGTTT AGCCTTTGTA
AGTAAGCAGA TTGAAAAGCT CATCACCCGT TTCTCAAAAG CTCAAGGCGA AGCCTCATGC
CGCGCGGCCG AATTAGGCAT GGCAGGGATT GTGGCCGTCA CCAACAGCTG CGTTGCTAAC
AACACAGTGT CTATCGTTGT GACGGGGGAT ATTGCTAAAG ATCTGGCAGA AAAACACGGT
GTTAGCCCTA AGCGCGCGGC CAGTGTGCTC GATATTTTTG CCTGTATTAT CCAAGGGTTA
ATTCCCTATG GCGCCCAAGC ACTGCTGATC GCTTCAACCT TTAGCATCAC ACCTCTAGCG
GCCGTCTCCC ACGCTTGGTA CTGCATGATC CTAGCGGCTG TCGCGATTGC GATTGTGATT
TTCCGTAAGC GCCACTAA
|
|---|
| Protein sequence | MSQSAQTTAP SSPASFIALL PLFVFLSLFI GAGVYFQSQG VDFAFYQLPS VIAILPAIIL
ALVLSKQKLN QAIDTFIGGI GHSNIIAMCL IYLLAGGFAA VAKATGGVDA TVALGLSLIP
SNLLLPGFFV IAAFIATAMG TSMGTIAAVA PIALGVADQA QIDYALMAGA VMSGALFGDN
LSIISDTTIA ATRTQGCDMK DKFRENLIFA IPASLLTFIA FVIAGQGQAD LAAQEIDFIK
VIPYLTILVL AVAGLNVFVV LTLGILLAGA AGFLTMDYGV IQFGKDIYAG FSNMQEIFIL
SMLVGGLAAL MQQQGGLAFV SKQIEKLITR FSKAQGEASC RAAELGMAGI VAVTNSCVAN
NTVSIVVTGD IAKDLAEKHG VSPKRAASVL DIFACIIQGL IPYGAQALLI ASTFSITPLA
AVSHAWYCMI LAAVAIAIVI FRKRH
|
|---|
| |