| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0952 |
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| Symbol | |
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| ID | 4255586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1094441 |
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| End bp | 1095151 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638121563 |
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| Product | pseudouridine synthase, Rsu |
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| Protein accession | YP_737008 |
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| Protein GI | 114046458 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.823269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.19606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTCG CCAAATACCT TGCCCAATGC GGCATTAGTT CACGCCGTGA AGCCTGCCGC
TTAATAGAGG CCGGACGCAT CAGCCTCAAT GGCAAGATAG CCAAGCATAC CGATGCCGTG
CATGTCGATG CTGACGGTCA TTGTCTCGAT AGCCTCTGCT TAGATGAAAA GCCCATTTCG
GGTGCCGAAG CGCTCAGCTA TTGGATCTTC AATAAAGCCG TAGGCACAGA TTGCCGCTTG
TTAGACGCCG ATAAGTCCAG TTTGCTGCAT TTACTGCCAA CCACGCCAAG ACTCTACCCT
GTTGGCAGAT TAGATAAGGA TTCCCGTGGC TTATTGCTGC TCACCAACGA TGGCGAACTC
ACCCATAAAC TGATGCACCC CAGTTTTGCC CACAGTAAAA CCTACCATGT GCAACTCGAT
AGACCCTTCA ACGATGCCTT TATCGAACAA ATGGCCAGCG GCGTGCAATA TAAAGAGGTG
CGCACACTCC CCTGCCAAGT CACGCGGTTA AGTGATGTGA GTTTTGAAAT AGTGCTTACC
CAAGGGTTAA ATCGCCAGAT TCGGCGCATG TCCAACGCCT TAGGTTATAA GGTGGTCGAC
TTACAACGCG TCGCGTTAAT GACATTAACG CTAGGTTCCT TAGCCGAAGG CGAAATGCGG
CCACTCAGCC CTGAGGAAGT TACAGCGCTT AAAGCCGCTG TGGCAATTTA G
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| Protein sequence | MRLAKYLAQC GISSRREACR LIEAGRISLN GKIAKHTDAV HVDADGHCLD SLCLDEKPIS
GAEALSYWIF NKAVGTDCRL LDADKSSLLH LLPTTPRLYP VGRLDKDSRG LLLLTNDGEL
THKLMHPSFA HSKTYHVQLD RPFNDAFIEQ MASGVQYKEV RTLPCQVTRL SDVSFEIVLT
QGLNRQIRRM SNALGYKVVD LQRVALMTLT LGSLAEGEMR PLSPEEVTAL KAAVAI
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