| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0941 |
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| Symbol | |
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| ID | 4256243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1077586 |
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| End bp | 1080198 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638121552 |
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| Product | endonuclease/exonuclease/phosphatase |
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| Protein accession | YP_736997 |
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| Protein GI | 114046447 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2374] Predicted extracellular nuclease |
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| TIGRFAM ID | [TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.578163 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.129599 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAATG TTAATAAGTT AACGGCTATT TCTTTAGCTG TAGCCGCAGC TTTGCCAATG
ATGGCAAGTG CTGATGTGAT GATCACTGAA TATGTTGAAG GTAGCTCAAA CAACAAAGCT
ATCGAGTTAT ATAACAGCGG TGATACGGCA ATTGATTTGG CGGGTTATAA ACTCGTTCGT
TATAAAGATG GCGCAACTGA TGCGCTCGAT ATGCAAGTAT TAGATGGACA GAGTATTGCG
CCAAAATCGA CAAAAGTCAT TTTAAACTCA AGCGCAGTCA TTACCCTTCC TCAAGGTGTC
GACAGTTTTT CGGGGTCTTT AAGTTTTAAC GGTGGCGATG CGGTTGCCTT AGTTAAAGAT
GGCGCAGTGG TCGATATTAT CGGTGACGTG CCAACGCCGA CTGGTTGGGG GCTGGATGTC
ACTCTCAAGC GTAAACTCGA TGCATTAGTC GCCAACACTG TCTTTAATCC TGCCCAGTGG
GAACAATTAC CTAAAGATAC ATTTACTGGT TTGGGTTCGC TAGAAACCCC AACTGAGCCT
GAAACACCTG TCTTCAGCTG CAGCGGCGCT AAAATCGTAC CTATTTATCA AGTCCAAGGT
GCGGGTGAAT CTAGCCCTTA TGTGCCAGCT GGCGTATTCG AGTCTGAAAG CGAAGTGACG
GTTCGCGGTG TGGTGACTGC CCGTGGCGAG AGCTTATTCA AAGGTTTCTA TCTCCAAGAA
GTGAAGGGCG ATAACTCGCC ATATACTTCC GATGGCGTGT TCGTGTTTTT AGGTGAGAAT
CCACCAGAAG CGATTCAACC CGGCGTTGAA GTCTGTGTTC AGGGTAAGGT GAAGGAATAC
TTCGGCCTAA CCCAAATAGA TATCAAAACC GACAAGAAAT TCGAAGTCGG TGCTAAGGGC
GAAGTCCCTG CTGCGGCGCC ATTCTATGTG GCCGATGGCG AAACTTTAGC GCAGGCATTA
GAGCGCTACG AAGGCATGAA CGTGAAACTG GATGCGGGCA GCGATCTGAA GATCAGCCGT
ACCTTCAGTT ACGATTATGC TGGCCGTCGT AATAATATGC TGGTGTCCTA CAAGGCGCCG
TTGATGAAGC CAACTCAGCT GTATCCAGCA CTGTCACCAG AGGCGACGGC TTTAGTTAAA
TCTAACCTTG AAAATCAGTT GGTTATCGAA TCTGACTACA AGCCAGCCGA TGGTGTTATT
CCTTACTTCC CTGACTTTAA CGTCGAAACA GGTTATATCC GTGTGGGTGA CCAGTTGACC
AACCTCGAAG GTGTGATTGG TTACAGCTAC GGTGCCTACC GTTTAGTGGC GACCAACACT
ATCACCGCTG GTGACTTTAT CCGTGGTGAT GATAGAACCG ACGCACCAAG TGTGGCCACT
AAGGGCGATA TCCGTGTCGC CAGCTTTAAC GTGCTGAACT TCTTTAACGA TGTTGTTGGT
GGTGACACTA ACCCATCGGG CAGTAACCGC GGCGCCTTGA CCGAAGAAGA AATGCTGCTG
CAACGTGCGA AAATCGTCAG CGCCATTACC GCCATGAACG CCGATATCGT CGGTTTAATG
GAAATCGCTA ACAACGGTTT TGGTGAAAAG AGCGCGATTA AGAACTTAGT CGATGCCTTA
AACGAGAAGC AAACCGCTGA AAATGCTTAC AGCTTCGTTG AAATCACCGA CGAAGATAAA
TACGACGGTA AGTACTTCGG TAGTGATGCC ATTACTGTAG GTATGCTTTA CCGCGCGGGT
AAAGTGAGCC TTGCGGGTGC GGCTCGTGCG ATTGATACTC CAGAGCAGCA CGCGACCGCT
GGCAGTGTGA CTCGTGTTAA AGATGGCAAG ACTGAGACTA ACCCAGGTAA CGATGCTTAC
CAACGTCACA GCCTAGCGCA AACCTTTAAG ATCCATGAAC AGAACTTAAC AGTTGTTGTT
AACCATCTGA AATCAAAAGG TTCAGGCTGT TTAGAAGATT GGGTCAACTT CGAAGAGTCA
GTCGATCCGG CTGATCAACA GGGCAAGTGT AATGCCTTCC GCGTATCGGC TGCTAAAGTG
CTCGGCGAAG CCTTAAAAGA CGTTAAAGGC GATCTGCTGG TGATTGGTGA TATGAATGCC
TACGGCATGG AAGATCCTAT CCGCGTATTG ACCGATTACG ATGCGAGCAA GTCTGAGCGC
GATATCATGA CCGCCTCATG GACCACCTTA GATGGCAAAG TGTTTGAGCG CCAAGGTAGC
AAGATTGAGA AGGGCTATGG CCTAATCAAC CTCAATACTC AGGCCCACGG CGCTGGTACT
TACTCATACA GCTACAACGG TGAGTTAGGT AACCTAGACC ATGCTTTAGC AAACACCAGT
CTTGCCAAGC GTTTAGTGGA TATCGAAGAT TGGCATATCA ACTCGGTGGA ATCTAACCTG
TTCGAATACG GCAAAAAATT CTCTGGTGAA CTGGCTAAAT CTGAGAATGC TTTCTCAGCG
TCTGACCACG ATCCCGTTAT TGTCGCACTT AGCTACCCAG CACCTGTTGA GCCACCAAAA
CCTGAGCCAA AACCAAAGGA TGATGGTGGT GCGTTAGGAT ACTTGGGTCT AGCCTTGCTA
TCCCTATTTG GCCTACAACG CCGTCGCCGT TAA
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| Protein sequence | MDNVNKLTAI SLAVAAALPM MASADVMITE YVEGSSNNKA IELYNSGDTA IDLAGYKLVR
YKDGATDALD MQVLDGQSIA PKSTKVILNS SAVITLPQGV DSFSGSLSFN GGDAVALVKD
GAVVDIIGDV PTPTGWGLDV TLKRKLDALV ANTVFNPAQW EQLPKDTFTG LGSLETPTEP
ETPVFSCSGA KIVPIYQVQG AGESSPYVPA GVFESESEVT VRGVVTARGE SLFKGFYLQE
VKGDNSPYTS DGVFVFLGEN PPEAIQPGVE VCVQGKVKEY FGLTQIDIKT DKKFEVGAKG
EVPAAAPFYV ADGETLAQAL ERYEGMNVKL DAGSDLKISR TFSYDYAGRR NNMLVSYKAP
LMKPTQLYPA LSPEATALVK SNLENQLVIE SDYKPADGVI PYFPDFNVET GYIRVGDQLT
NLEGVIGYSY GAYRLVATNT ITAGDFIRGD DRTDAPSVAT KGDIRVASFN VLNFFNDVVG
GDTNPSGSNR GALTEEEMLL QRAKIVSAIT AMNADIVGLM EIANNGFGEK SAIKNLVDAL
NEKQTAENAY SFVEITDEDK YDGKYFGSDA ITVGMLYRAG KVSLAGAARA IDTPEQHATA
GSVTRVKDGK TETNPGNDAY QRHSLAQTFK IHEQNLTVVV NHLKSKGSGC LEDWVNFEES
VDPADQQGKC NAFRVSAAKV LGEALKDVKG DLLVIGDMNA YGMEDPIRVL TDYDASKSER
DIMTASWTTL DGKVFERQGS KIEKGYGLIN LNTQAHGAGT YSYSYNGELG NLDHALANTS
LAKRLVDIED WHINSVESNL FEYGKKFSGE LAKSENAFSA SDHDPVIVAL SYPAPVEPPK
PEPKPKDDGG ALGYLGLALL SLFGLQRRRR
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