| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0937 |
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| Symbol | |
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| ID | 4256239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1074252 |
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| End bp | 1074797 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638121548 |
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| Product | peptide deformylase |
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| Protein accession | YP_736993 |
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| Protein GI | 114046443 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000269089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0932727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAAG ATGCGATATC ACCCACACCC AGTCAGCCAC TGCCTATTGC CGTGGTGGGT
GAAGCCATTT TAAAAGAGCA AGCCATTGTA GTTCGCGACT TCGATACGGC CTTGAGTCAA
TTAGCAGAGC AGATGGCAGT GAGCATGGTG GCCGCGAAAG GCGTTGGCAT TGCCGCACCG
CAAGTGCACA GCCCACTGGC ACTGTTTATC ATGGCATCAC GGCCGAACGA GCGTTACCCC
GATGCGCCGC TGATGAACCC AGTTGTAGTG GTCAACCCAG AGATCTTGTC TGCCTCTGCG
GATTTAGTCA GCGGTGAAGA AGGTTGTTTA TCGGTTCCCG GACAAAGGTT TACAATTTGG
CGCCACCAGC AGATAGTAGT GCGCTATCAA AACCTCGCAG GACAGTGGCA ACGCTCTGAG
TTAACAGGTT TTATTGCACG TATTTTTCAA CATGAGTTTG ATCATCTTCA GGGGATCACT
TTGCTTGAGC GTTCACAAAT GCCAGAACAA AAACACATGG CGCGAGAAGG TAAACCACAG
GCATGA
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| Protein sequence | MFKDAISPTP SQPLPIAVVG EAILKEQAIV VRDFDTALSQ LAEQMAVSMV AAKGVGIAAP
QVHSPLALFI MASRPNERYP DAPLMNPVVV VNPEILSASA DLVSGEEGCL SVPGQRFTIW
RHQQIVVRYQ NLAGQWQRSE LTGFIARIFQ HEFDHLQGIT LLERSQMPEQ KHMAREGKPQ
A
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