Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0928 |
Symbol | |
ID | 4255350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1061574 |
End bp | 1062524 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638121539 |
Product | hypothetical protein |
Protein accession | YP_736984 |
Protein GI | 114046434 |
COG category | [S] Function unknown |
COG ID | [COG1801] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.244056 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGTCGT TCCAGTCCCC TCCCCATAGC GCGCGACATT TACGTCTCGG GCTTGCCATG TGGTCACATA ACCATTGGCA AGAAAGTGTT TATGGTTCAA GCACTAAACA AGCTGAAAGA CTTGCCCGCT ATGCCAGTAT CTTCAACACA GTGGAAGGCA ACACCAGCTT TTACGCGACG CCAAATGCGC AAACAGTGAT GAATTGGCAC AGCGCCACTC CCGATGATTT TCGCTTTACC TTTAAACTGC CGCAAACCAT CACCCATCAA AAGCAGTTGC AGGATTGTCA GCAGGAGTTA TTGGCCTTCT TCCAAGTGAT GTCACTCTTG GTTGAAAAAA CCGGTTTGTG GAAAATTCAG CTTCCCGCTT CCTTCGGCCC CGAACAGCTA CCGGTGTTAG CACGTTTTTT TGATCTTTTA CCGCAAGGTT TAAGCTATGG CGTAGAGGTT CGCCATTTAG GCTTTTTTGC CAAAGGAGAC GCAGAGCGAG CGCTAAATCG CCTGCTGATG GACAGACAAA TCAATCGCAT CATCATGGAC AGTCGACCGC TGTTTGCCCT GCCGCCCGCG AACGAGGCGA TTATTGATGC CCATAAGAAA AAGCCACAGG TGCCCGTTCA CGCTATCGCG ACCGCCCATA CGCCCGTGGT GCGTTTTATT GGCCAAACGG ATGGCACGAT TGAAGCCTTG GCGGCGAGTA ACGATAAATT GCAGGTAAAG AATAACGATA GCTTTTTTAA CAACTGGCTA AGGCAACTCG CACTCTGGAT AAAAGAGGGG CGCGAGCCCT ATCTGTTTAT CCATACGCCT GACAACCAGA CCGCGCCCGA ATTAGCGGTC CGTTTATACC AGCAGTTGCA GCAACAACTG GCCGATGAGA TCAGCTTGCC CACTATTCAG TTGCATAAAG CGTTGGCAGA GTCTGCCGCG CAGATGCAAC TGACGTGGTA A
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Protein sequence | MTSFQSPPHS ARHLRLGLAM WSHNHWQESV YGSSTKQAER LARYASIFNT VEGNTSFYAT PNAQTVMNWH SATPDDFRFT FKLPQTITHQ KQLQDCQQEL LAFFQVMSLL VEKTGLWKIQ LPASFGPEQL PVLARFFDLL PQGLSYGVEV RHLGFFAKGD AERALNRLLM DRQINRIIMD SRPLFALPPA NEAIIDAHKK KPQVPVHAIA TAHTPVVRFI GQTDGTIEAL AASNDKLQVK NNDSFFNNWL RQLALWIKEG REPYLFIHTP DNQTAPELAV RLYQQLQQQL ADEISLPTIQ LHKALAESAA QMQLTW
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