| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0921 |
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| Symbol | |
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| ID | 4255343 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1053422 |
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| End bp | 1054312 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638121532 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_736977 |
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| Protein GI | 114046427 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.422562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTTA AAGTGCTGCG TTATTTTATC GAGATCATCG ATGCCGGCGG TTTTGGTAAG
GCCAGCGAAA AGGTTCATCT CACCCAACCC GCCCTCTCCA AGGCGCTGCG CCAATTAGAG
GAAGAGCTCG ATCTGGTGCT ACTCGAGCGC GGCAAACGTG GCACTCAGGT TAAGCTCACC
CAAGCGGGAG AAGTGGTCTA TCGCCATGGC AAGGAGTTAC TCGCTGGCCG ACAACGCATG
CTGGCCGAAC TCAGTGCCCA GCGCAGTTTA ACCGCAGGCG AATTAAAACT CGGTCTCGCG
CCACTCGGCA GTGCTGAAAT TTTTGCCCCA ATCATTGCCA AGTATCGCCA GCAATATCCG
CAAATCGATA TGCATTTATT GGTTCGCGGC GGCGTGGAGC AAACCTTAGC GATTCAAAAA
GGTGAAATTG AACTGGCAAC TGGGATTATT AACTTCGACG ATGGTTACCA CGGTATTCGA
GTGTTTAACG ATCCTATGGT GGTGGTGCTG CCCAAGGAGA ATCCCCTCAC CTCACGAGCT
ATGCTGTCGA TCCACGACTT AGTCGACGAG CCACAAGTGA TGTTTGAGAC CGAATACACC
TTGTATCAAC TGGTGTTAAC CGCTTGCCAA CACGCCGGAT TTACCCCTAA AAACATCACT
CGAGTCAGCC AAGCCGACTT CGGGATCGCC CTTGTGGCGG CGGGCACGGG CGTGATGATA
CTGCCGCGCT CTATCGCGCG GCGTTACAGT GTATCGGGAG TGGTGAATAT TCCATTGGCA
AGCGATGAAC TGCGCTGGGA GCTATCGCTG TTTTGGCGCA AAGAACAGGT ATTGTCCTTT
GCGGCACAGG CGATGATTGC GTTAGTGGAG AAACACTTAA CTCAAAAGTA G
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| Protein sequence | MDLKVLRYFI EIIDAGGFGK ASEKVHLTQP ALSKALRQLE EELDLVLLER GKRGTQVKLT
QAGEVVYRHG KELLAGRQRM LAELSAQRSL TAGELKLGLA PLGSAEIFAP IIAKYRQQYP
QIDMHLLVRG GVEQTLAIQK GEIELATGII NFDDGYHGIR VFNDPMVVVL PKENPLTSRA
MLSIHDLVDE PQVMFETEYT LYQLVLTACQ HAGFTPKNIT RVSQADFGIA LVAAGTGVMI
LPRSIARRYS VSGVVNIPLA SDELRWELSL FWRKEQVLSF AAQAMIALVE KHLTQK
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