Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0905 |
Symbol | |
ID | 4257428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1038013 |
End bp | 1039218 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638121516 |
Product | major facilitator transporter |
Protein accession | YP_736961 |
Protein GI | 114046411 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAA CTCAAAACGC AGATCCCAAA GCACTGCTGC TGTGGATGAC GTTTGTTATG TCGCTCGTCT TCGCCGTTTG GCAAGCCCTA CTGAACAACT TCGTGATTGA AAAAGCCCAA TTCACTGGCG CCGAAATCGG TATGCTGCAA AGCCTAAGGG AAATCCCCGG CTTCTTGGCC TTTACCGCTA TTTTTGTATT GCTGTTAGTG CGCGAGCAAG CCTTCGCCCT GCTGTCATTA GCCCTTCTGT GCATTGGCGT GGCAATTACC GGCTTCTTTC CGCAGGTATT GGGCTTATAC CTCACCACAG TATTGATGTC GGTTGGGTTC CATTACTTTG AAACCATTAA CCAATCCCTC ACCCTACAAT GGGTCGCGAA GCAGGATACC GCAGGTTTTA TGGGCAAAGC GCTGGCATGG CGCTCGGCAG CGGCCTTGGT CGGCTATGGC AGTATTTGGA TTGTCATGAC TTGGCTAAAA CTCGATTACT GGCATATGTA TTTGATTATT GGTGTATTAG GCCTGCTGAT GGTGATCAGC ATGAGTCTGT ACTACCCACA GTTTGATACC CACGAAGTGC AACACAAAAA AATCATCCTA CGTAAACGCT ACTGGTTGTA TTACCTGTTA ACCTTCTTCT CTGGCGCCCG TCGGCAGATT TTTATGGTGT TCGCAGGCTT TATGATGGTC GAGAAATTCG GCTATACCGT CAGTGAAATC ACCGCCCTTT TCCTAATCAA CTATGTGGTC AATCTATTGT TTGCGCCGTC CATTGGTCGC CTAATTGGCC GCATTGGCGA GCGCAACGCC CTCACGGTGG AATACATTGG GCTCTTTTTT GTGTTTGTCA GCTATGCGCT TGTCGAGCAG CCCCATATGG CCGCCGCCCT CTATGTGATT GACCATTTGC TGTTTGCGAT GGCAATTGCC ATGAAAACCT ATTTTCAAAA GATTGCCGAT AGCAAAGATA TTGCGGCCAC CATGTCGGTC AGTTTTACCA TTAACCATAT CGCCGCAGTG ATTATCCCCG TGCTCTTGGG CTTACTGTGG CTGAGCGATC CCGCCCTCGT CTTCTACATT GGCGCCGGAT TTGCGGTCTG TTCCTTAATA TTAGCCCTCA ATGTACCGCG CCATCCGTCA CCCGGGAATG AAACCAATTG GGCTTGGTCT GCTAAATCCA TAGAAAAACC GAGTCTCGAC AGTTAA
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Protein sequence | MKTTQNADPK ALLLWMTFVM SLVFAVWQAL LNNFVIEKAQ FTGAEIGMLQ SLREIPGFLA FTAIFVLLLV REQAFALLSL ALLCIGVAIT GFFPQVLGLY LTTVLMSVGF HYFETINQSL TLQWVAKQDT AGFMGKALAW RSAAALVGYG SIWIVMTWLK LDYWHMYLII GVLGLLMVIS MSLYYPQFDT HEVQHKKIIL RKRYWLYYLL TFFSGARRQI FMVFAGFMMV EKFGYTVSEI TALFLINYVV NLLFAPSIGR LIGRIGERNA LTVEYIGLFF VFVSYALVEQ PHMAAALYVI DHLLFAMAIA MKTYFQKIAD SKDIAATMSV SFTINHIAAV IIPVLLGLLW LSDPALVFYI GAGFAVCSLI LALNVPRHPS PGNETNWAWS AKSIEKPSLD S
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