Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0899 |
Symbol | |
ID | 4257422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1031225 |
End bp | 1032055 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638121510 |
Product | uroporphyrinogen-III C-methyltransferase |
Protein accession | YP_736955 |
Protein GI | 114046405 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0007] Uroporphyrinogen-III methylase |
TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAATTT TATCTTTACC GGGCCAAAGG GCGAAGGGCA AGGTCTGGCT TGTTGGCGCA GGCCCCGGAG ACGTTGAACT CTTAACCCTC AAAGCCTGGC GCATTCTCAA GTCCGCCGAC GCTGTGCTAT ACGATGCGCT TGTCAGCCAA GATATCCTCG ATCTGATCCC TAAAGATGCA GAGAAGATTG CCGTCGGCAA ACGTGCCGGT AAGCATAGTG CTGCGCAAGA TGAAATTAAT CAGTTACTTG TGACGAAAGC CTATACCCGT AAAAACGTGG TACGCCTCAA GGGCGGCGAT CCGTTTATCT TTGGTCGCGG TGGTGAAGAG TTACAAACCT TAGTTGAAGC GGGCGTCGAG TTTGAAGTGG TTCCCGGCAT TACTGCCGCC AGTGGCACCT CGGCCTATGC GGGCATTCCA TTAACTCACA GGGATTATGC CCAAGGGGTG ACTTTTATCA CTGGCCATTG TCAGCTCGAA AGCCGCCCGA TGGACTGGCA GGGTTACGCT AATCCAAACA ATACCTTAGT TGTGTATATG GGGATTCTAA ATGCGGGCAT TATTCGTCAA GGATTAATCG ATGCTGGCCG TAGCCCAAAA ACCCCTGTGG CGATTGTCTC TAAGGCGACC ACTCAGTCGC AGCAGCGTTT TATTGGTCAA TTAGATTCAC TCGAACAGCT TGCGGCCGAT CCGCAATTGC AAATGCCCGC CCTGATGATT ATTGGTGAAG TGGTTGCGCT GGCAGACAGC TTAAATTGGT TCCAACCTAA GGGTGAAGGC GAGTCAGCGC TCGACACCGC AGATGCCGCC AAGATTGTGG CAAAAATTTA G
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Protein sequence | MEILSLPGQR AKGKVWLVGA GPGDVELLTL KAWRILKSAD AVLYDALVSQ DILDLIPKDA EKIAVGKRAG KHSAAQDEIN QLLVTKAYTR KNVVRLKGGD PFIFGRGGEE LQTLVEAGVE FEVVPGITAA SGTSAYAGIP LTHRDYAQGV TFITGHCQLE SRPMDWQGYA NPNNTLVVYM GILNAGIIRQ GLIDAGRSPK TPVAIVSKAT TQSQQRFIGQ LDSLEQLAAD PQLQMPALMI IGEVVALADS LNWFQPKGEG ESALDTADAA KIVAKI
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