Gene Shewmr7_0899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0899 
Symbol 
ID4257422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1031225 
End bp1032055 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content52% 
IMG OID638121510 
Producturoporphyrinogen-III C-methyltransferase 
Protein accessionYP_736955 
Protein GI114046405 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0007] Uroporphyrinogen-III methylase 
TIGRFAM ID[TIGR01469] uroporphyrin-III C-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATTT TATCTTTACC GGGCCAAAGG GCGAAGGGCA AGGTCTGGCT TGTTGGCGCA 
GGCCCCGGAG ACGTTGAACT CTTAACCCTC AAAGCCTGGC GCATTCTCAA GTCCGCCGAC
GCTGTGCTAT ACGATGCGCT TGTCAGCCAA GATATCCTCG ATCTGATCCC TAAAGATGCA
GAGAAGATTG CCGTCGGCAA ACGTGCCGGT AAGCATAGTG CTGCGCAAGA TGAAATTAAT
CAGTTACTTG TGACGAAAGC CTATACCCGT AAAAACGTGG TACGCCTCAA GGGCGGCGAT
CCGTTTATCT TTGGTCGCGG TGGTGAAGAG TTACAAACCT TAGTTGAAGC GGGCGTCGAG
TTTGAAGTGG TTCCCGGCAT TACTGCCGCC AGTGGCACCT CGGCCTATGC GGGCATTCCA
TTAACTCACA GGGATTATGC CCAAGGGGTG ACTTTTATCA CTGGCCATTG TCAGCTCGAA
AGCCGCCCGA TGGACTGGCA GGGTTACGCT AATCCAAACA ATACCTTAGT TGTGTATATG
GGGATTCTAA ATGCGGGCAT TATTCGTCAA GGATTAATCG ATGCTGGCCG TAGCCCAAAA
ACCCCTGTGG CGATTGTCTC TAAGGCGACC ACTCAGTCGC AGCAGCGTTT TATTGGTCAA
TTAGATTCAC TCGAACAGCT TGCGGCCGAT CCGCAATTGC AAATGCCCGC CCTGATGATT
ATTGGTGAAG TGGTTGCGCT GGCAGACAGC TTAAATTGGT TCCAACCTAA GGGTGAAGGC
GAGTCAGCGC TCGACACCGC AGATGCCGCC AAGATTGTGG CAAAAATTTA G
 
Protein sequence
MEILSLPGQR AKGKVWLVGA GPGDVELLTL KAWRILKSAD AVLYDALVSQ DILDLIPKDA 
EKIAVGKRAG KHSAAQDEIN QLLVTKAYTR KNVVRLKGGD PFIFGRGGEE LQTLVEAGVE
FEVVPGITAA SGTSAYAGIP LTHRDYAQGV TFITGHCQLE SRPMDWQGYA NPNNTLVVYM
GILNAGIIRQ GLIDAGRSPK TPVAIVSKAT TQSQQRFIGQ LDSLEQLAAD PQLQMPALMI
IGEVVALADS LNWFQPKGEG ESALDTADAA KIVAKI