Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0898 |
Symbol | |
ID | 4256550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1029910 |
End bp | 1030794 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638121509 |
Product | phospholipase A(1) |
Protein accession | YP_736954 |
Protein GI | 114046404 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2829] Outer membrane phospholipase A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.110394 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTAT TTTATAAAGG TATCGCATTA ATTGGGCTGT TGACTTGTAC CGGGCTACAG GCGGAAGAAT CCCTAGTTGA AGGGCGCGTA CAGGACGAAC TTGCCACCTC AGAACGTCCC TTTGTGATCA CGCCGCATAA AGTGAATTAC ATTTTACCCG CCACCTATAA CCCCGATCCC AATATGGCCC CCTTCGCCCA AGATGCGGCA GAGAACAACT ACACACTGGA CGAGATGGAA GCTAAGTTCC AGATAAGCTT TAAGTTTCCT ATTTGGTACA ACGTCTTTGG CGATAATGGC CACCTGTTTT TTGCCTACAC TAACCAATCC TATTGGCAGT TGTATAACAA GGAGATCTCC TCCCCCTTCC GTGAGACTAA CCACGAACCC GAAATCTTTA TGCTGTTTAA CAATGATTGG AAAATCGGTA GCGTGACCAA CTCCTTCTGG GGATTTGGTG CTGTGCATCA ATCGAATGGT AAATCTGGGC TATTATCCCG AAGCTGGAAC CGCATCTATG GCACCATGAT CTTCGATGCT GGCCCACTGG CGTTTTCAAC TAAGGTATGG TGGCGGATTC CGGAGGATGA AAAAACCGAT ATCCATCAAC CCCGTGGTGA CGACAACCCC GATATTGATG AATACATAGG CAAAGCCGAG TTTGTGGGTG TGTATGGGAT TGATGATCAT AGGTTCACCC TCACCCTAAA AACCAACTTT AAAGACATTG ACCGTGGCTC GGCGGAGCTG ACTTGGAGTT ACCCCATTGT CGGTAATTTA CGCCTTTATA CTCAATACTT TAACGGATAT GGCGAGAGTC TTATTGACTA CAATTACCAT AACCAACGCA TCGGTATCGG CGTATCACTC AACGATATTC TCTAA
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Protein sequence | MSLFYKGIAL IGLLTCTGLQ AEESLVEGRV QDELATSERP FVITPHKVNY ILPATYNPDP NMAPFAQDAA ENNYTLDEME AKFQISFKFP IWYNVFGDNG HLFFAYTNQS YWQLYNKEIS SPFRETNHEP EIFMLFNNDW KIGSVTNSFW GFGAVHQSNG KSGLLSRSWN RIYGTMIFDA GPLAFSTKVW WRIPEDEKTD IHQPRGDDNP DIDEYIGKAE FVGVYGIDDH RFTLTLKTNF KDIDRGSAEL TWSYPIVGNL RLYTQYFNGY GESLIDYNYH NQRIGIGVSL NDIL
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