Gene Shewmr7_0895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0895 
SymbolmtgA 
ID4256547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1025175 
End bp1026017 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content50% 
IMG OID638121506 
Productmonofunctional biosynthetic peptidoglycan transglycosylase 
Protein accessionYP_736951 
Protein GI114046401 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAATG CCACCGCAAA CGGCCCCTTT GGTGGAACTA TTGATGAGGA TTACTGGATG 
ACCGCCCCTA TGTATGCCAT GCGCGATCAT GTCAATCGTC CTCAAGGGAA CAAATCCAAT
CGCCCAGCAC CCAGACCCAA GGCGCGCGGC TTTAAGCGCA TAGTCGCTTG GTTCGTTAAA
CTCATCTTGG GCTTATTACT CGCCTCTGTT TTAAGCGTGG TGCTACTGCG TTTTATTGAC
CCGCCGATGT GGACTTGGCG GATTGAACGG GCATTATTCC CGCCTGCACC AGTGACAGAT
GTGCGACATC AATGGCGCTC ACTCGAGCAA ATTTCCCCTG AATTACAATT AGCCGTGATT
GCCGCAGAGG ATCAAAAGTT TGCCAGCCAC ACGGGGTTTG ATTTAGCCGC AATAAGTTCG
GCTATCGAAT ACAACCAAAA GGGCAACAAG GTTCGCGGTG CGAGTACCTT AAGTCAGCAA
GCGGCGAAAA ATTTGTTTAT GTGGTCGAGC CGCAGTTTTA TCCGCAAGGG AATTGAGGCC
TGGTTTACCC TGTTGATGGA ATTGATTTGG GATAAGTCGC GGATCCTCGA AGTGTATCTG
AATATCGTCG AATTTGGCCC CGGAATATAT GGCGCAGAAG CCGCATCGAA ACATTATTTT
GGTAAGAGTG CCGCTAAATT AACCCGTTAT GAGGCGTCAT TATTAGCAGC GGTATTACCC
AATCCTTGGC GATATAAAGT TTCGCCGCCT TCACCTTATG TTGAGCAGCG CTCCGCTTGG
ATCCGTAAGC AAATGCGCCA GTTAGGGGAA GTAACGCTTA ACCGTGTTCA TAATGCCGAT
TAA
 
Protein sequence
MANATANGPF GGTIDEDYWM TAPMYAMRDH VNRPQGNKSN RPAPRPKARG FKRIVAWFVK 
LILGLLLASV LSVVLLRFID PPMWTWRIER ALFPPAPVTD VRHQWRSLEQ ISPELQLAVI
AAEDQKFASH TGFDLAAISS AIEYNQKGNK VRGASTLSQQ AAKNLFMWSS RSFIRKGIEA
WFTLLMELIW DKSRILEVYL NIVEFGPGIY GAEAASKHYF GKSAAKLTRY EASLLAAVLP
NPWRYKVSPP SPYVEQRSAW IRKQMRQLGE VTLNRVHNAD