Gene Shewmr7_0894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0894 
Symbol 
ID4256546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1023758 
End bp1024555 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content51% 
IMG OID638121505 
Productphosphoadenosine phosphosulfate reductase 
Protein accessionYP_736950 
Protein GI114046400 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID[TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin)
[TIGR02057] phosphoadenosine phosphosulfate reductase, thioredoxin dependent 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGATC TTGATTCTGG GGTGACGGGT TCCGGCTTGC CGAACGCGTT GCAGAGCGTA 
GTAAGTCACA GCGAACTGAA AGCGCTGCTG ACGGCGCCTA AGGATGTGCA GCGAGCGGAA
CTGGAACGCA TTAATCACTT CTTGGCCGGA TTGACGGCTC AAGAGCGAGT GCTCTGGGGC
TTAGCCTATT TGCCGGGGAA TCACGCGCTG TCATCCAGTT TTGGGATCCA GGCGGCGGTG
ATGCTGCATA TGGTGAGTCA GGTGCAATCG GATATTCCGG TGATCTTAAC GGATACTGGG
TATCTCTTTC CTGAGACATA TCAGTTTATT GACCAGCTCA CCGAGCGCTT ATCCTTAAAC
CTCAAGGTTT ACCAAGCGCC GATGACCTCG GCATGGCAGG AAGCGCGTTT TGGCAAGCTG
TGGGAGCAGG GCTTAGATGG GCTCGAGCGT TATAATCGAC TGAATAAAGT GGAGCCGATG
CAACGTGCTT TGGCAGAACT TGAAGTCAGC ACTTGGTTTG CAGGACTTCG TCGTAGCCAG
TCGAGCACTC GCGAAGAGTT ACCGATATTG GCTATCCACG GTACTCGCTT TAAGCTGCTG
CCGATTATCG AATGGTCGAA CAAAGATGTG CACTTGTATC TGACGCAATT TGACTTGCCT
TACCATCCGC TATGGGATCA AGGGTATGTT TCTGTTGGGG ATACCCATTC GAGTAAACCC
TTAGAATTAG GGATGACTGA AGAAGAAACC CGCTTTAATG GTCTAAAACG TGAATGCGGT
TTGCATTACG AAATATAG
 
Protein sequence
MADLDSGVTG SGLPNALQSV VSHSELKALL TAPKDVQRAE LERINHFLAG LTAQERVLWG 
LAYLPGNHAL SSSFGIQAAV MLHMVSQVQS DIPVILTDTG YLFPETYQFI DQLTERLSLN
LKVYQAPMTS AWQEARFGKL WEQGLDGLER YNRLNKVEPM QRALAELEVS TWFAGLRRSQ
SSTREELPIL AIHGTRFKLL PIIEWSNKDV HLYLTQFDLP YHPLWDQGYV SVGDTHSSKP
LELGMTEEET RFNGLKRECG LHYEI