Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0885 |
Symbol | |
ID | 4256537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1012190 |
End bp | 1013116 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638121496 |
Product | lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase |
Protein accession | YP_736941 |
Protein GI | 114046391 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
TIGRFAM ID | [TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.72225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTCGAGA AAGCTGAGTT TTCATCTTCT TTATATCATC CGAAGCACTG GCCCATGTGG TTTGGGGTGT TAGTGATGCG TATCACCCAA GTATTGCCTC TCTCTTGGCA GATGAAGTTA GGTAAAGGCA TAGGCCGATT AGTGAAGGCC GTTGCAGGCA GTCGAACCCA TACCGCACGC CGCAATTTAA CCCTCTGTTT CCCCGATATG CCCGAGTCGG AGCGTGAAGC CCTGCTGACC CGCAACTTTG AAGAAACGGG TAAAGCGATT TTCGATACCA TCAATGCCTG GTGGTGGTCC GATGAAAAAA TCCAACAACA TATGCAGATC ACTGGCAAAG AATACGTTCA AGACACCTTG AATGCCGGCC ATGGGGTGAT TTTGTTTGCA GTGCACTGCT TACCACTGGA AATGGGTGCG CGTATTTTTG GTCAATTCCA ACCCGGTGTT GGGGTGTACC GTCCACACAA CAATCCGGTG ATGGAATACC TGCAGGTCAA AGGCCGCCTA CGCTCAAACA AAGCCTTAGT ACCTAAACGC GATCTACGCC AGATGGTACG TTGTTTACGC AATCCCGATG TGATTTGGTA TACCGCCGAT CAGGATTTTG GGCGTTCGAG TGCGGTATTT ATTCCCTTTT ATGCCGTGCC CGATGCAGCA ACCATTACCG GCGCCACCAC ACTGGCCAGA CTTGGCAAGG CCAAAGTGCT GCCCTTCTTC GTGGAGCGCA CCGAAGGCGA TAAGGGTTAC CATATTGAGA TTATGCCGCC GCTCGATAAC TTCCCCGGCG AAGATGAACT GACCGATGCC ATTCGCGGTA ACAAAATTAT CGAAGGGATT ATCGATAGGA ATCGCGCCCA ATATATGTGG CTCCACCGCC GCTTTAAAAC TCGTCCAGAT CCAACGGACA AGTCCTTATA TAAATAA
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Protein sequence | MVEKAEFSSS LYHPKHWPMW FGVLVMRITQ VLPLSWQMKL GKGIGRLVKA VAGSRTHTAR RNLTLCFPDM PESEREALLT RNFEETGKAI FDTINAWWWS DEKIQQHMQI TGKEYVQDTL NAGHGVILFA VHCLPLEMGA RIFGQFQPGV GVYRPHNNPV MEYLQVKGRL RSNKALVPKR DLRQMVRCLR NPDVIWYTAD QDFGRSSAVF IPFYAVPDAA TITGATTLAR LGKAKVLPFF VERTEGDKGY HIEIMPPLDN FPGEDELTDA IRGNKIIEGI IDRNRAQYMW LHRRFKTRPD PTDKSLYK
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