Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0872 |
Symbol | |
ID | 4256506 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 993928 |
End bp | 995208 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638121483 |
Product | phosphate-selective porin O and P |
Protein accession | YP_736928 |
Protein GI | 114046378 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3746] Phosphate-selective porin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCTAAAT TGACCTTACT TGCCGCGGCA ACCGCTGTGG CTTTTACTGG TTTTGCGCAT GCGCAAGACT TAACGCCACA AGAGCTTCAA GCACAACTCA CCCAATTGAC TCAAGAAGTA AACCTGCTAA AACAACAGCA GGCAGTGAAT GCCGCCGCGA CTCCATCTGA GCCAAGTGCG CCAGCCTTTG AGATAGGTGG TCGTATTCAA CTCGATTACA ACCTCTTCAA TGGTGCCTAT AACGCCGAAC ATAACGGCAG TCGCGCGCAG GATATTTTCC CCCGCCGAGT ACGTACCTTT GTGGAAGGTG AATTATCGGA TTGGGATTAC AAGTTACTAC TTGAATTTGC TGAAAATACT GCTGAAATCG TTATGGCTAG GATGCGTTAT TCGGGTTTTG AGAATGGCCC TAAACTGCAA TTGGGTAAGT TGCGTGAGGA TATCAGCCTC GATGCGCTCA CCAGCAGTAA TCACATTGCG CTGATCGAAC GTTCTAGCCT TGCCGATACT ATGTCACCCT ATTTCCGCTG GGGTGTTTCT GCCTACCAAT ATTTCCCCAG CACAGGTTTA CGTTACGCCT TGGGTGTTTA TAAAAACGAT GCCTTTGGTA GCGATGGCAA AGATGACACC GATGACTTGA ATTTTGCCCT GAGCTCGCGA GTGACCTGGT CACAGGCCAC TGAACCGGGC CAAGTGCTGC ATGCGGGCTT GTGGTACTCG GCGCGCCAAA TGGACGGCGA TAACTTGTCT GCCAGCTTTG CTCGCGGCGA ACTGCGAGAG ACCAATACTC GCCTGATTAA CTATGTTGCG GGTGGTGAAA CGGCGGCGAT AGATCGGCTA AATCAAGTGG GTTTAGAGCT GGCATTCCAA CATAAGGCTT TGTTATTGCA AGGCGAATAC GCCCAGCGGA ATTTAACGAC CCAAGATCCT CTGTCTGTGC TTGATGGTGA GCGTTATGAG GCGTATTACC TGCAGGCGAG TTACTTCTTA ACGGGCGAAC AGCGCAGCTA TTCCAAGGGG AGCGCGGTGT TTTCTCAACC TAAGGGCGTA ACCGATGCAT GGGAATTGGC GGCACGTTTC TCTAGCGTGG ATGCAAGCTC CGACTTTCAA GGCACTCAAG CCCAAACCTA TACCTTAGGT GTGTCTTACT ACTTCAATCC AAAAATCAAA GTGATGGCTA ACTACATTCA TTCTTCCGTC GATGGGGCAG GCACGATTGC CTTAGTCGGC AATGAAGATG TGGGCGATGC CTTTGCTGCC CGTTTGCAAT ATGTGTTTTA G
|
Protein sequence | MPKLTLLAAA TAVAFTGFAH AQDLTPQELQ AQLTQLTQEV NLLKQQQAVN AAATPSEPSA PAFEIGGRIQ LDYNLFNGAY NAEHNGSRAQ DIFPRRVRTF VEGELSDWDY KLLLEFAENT AEIVMARMRY SGFENGPKLQ LGKLREDISL DALTSSNHIA LIERSSLADT MSPYFRWGVS AYQYFPSTGL RYALGVYKND AFGSDGKDDT DDLNFALSSR VTWSQATEPG QVLHAGLWYS ARQMDGDNLS ASFARGELRE TNTRLINYVA GGETAAIDRL NQVGLELAFQ HKALLLQGEY AQRNLTTQDP LSVLDGERYE AYYLQASYFL TGEQRSYSKG SAVFSQPKGV TDAWELAARF SSVDASSDFQ GTQAQTYTLG VSYYFNPKIK VMANYIHSSV DGAGTIALVG NEDVGDAFAA RLQYVF
|
| |