| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0864 |
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| Symbol | |
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| ID | 4256498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 985522 |
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| End bp | 986493 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638121475 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_736920 |
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| Protein GI | 114046370 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2203] FOG: GAF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.679659 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTAC CTCCCATTCC TGAGAATGAG TTACAACGTT TAGCCACCCT GAGGGCGCTG
AATATACTCG ATACCGAAGC CGAGGAAAGG TTTGATCGTA TCACTCGGTT GACTCGGCGG
ATCTTTGCCT TGCCGATTTG TTTGGTCACC TTAGTGGATG CAAATCGCCA ATGGTTTAAG
TCTCGCCAAG GGTTAGAGGT GACAGAGACA TCGAGGGATA TTTCCTTTTG CGCCCATGCT
ATTAATCACA GCGGTGTCTT TATCATTAAC GATGCCCTCA AGGATCCGCG GTTTTGCGAT
AATCCCTTAG TCATAGAGCC TCCACATATC CGCTTTTATG CCGGCTATCC TCTCACCATC
CACGGCGAGT ATCGGGTGGG AACGCTGTGC TTAATCGGTA GTGAACCTAG GGAATTTAGT
GCTGATGACA TTGAAACCTT AACGGATCTG GGACAGATGG TTGAGGCTGA GTTGTTGTCT
ATTGCGCAAA ATACCTTAGA TCCTTTAACG ACGATTTCTA ATCGGAGAGG ATTTGAACTG
CTGGCCTATC AATCACTCGC AAGTTGCCGT CGAACGGATG CCGAGGCGGC ATTGGTATTT
TTTGACCTCG ACTTTTTTAA AGAGGTCAAT GACAGTTTTG GCCACCGCAA GGGTGATCAA
GTACTCTATG ATTTTGCTCA TATTTTAATG GCAGCATTTC GGGAGTCGGA TGTAATTGCA
CGGCTTGGCG GCGATGAGTT TGTGGTGCTG CTCAGTTTTG TGCAGAGTGA CTCGGTCAAC
TTTGCGATTG AGCGTTTCAA GCTATTGCTT GCCCAGTATA ATCAACAACA TCCTGATCAG
CATCCCCTAG CAACTAGCAT AGGTGTCGCC CATTGGTCGC CTGAGTCCGA TATGAGCCTC
GAGGATTTAC TCGATACTGC TGACCGAGCT ATGTATCAAA ATAAAGCTTC GCACCACTCG
CCTAAGTCTT AG
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| Protein sequence | MQLPPIPENE LQRLATLRAL NILDTEAEER FDRITRLTRR IFALPICLVT LVDANRQWFK
SRQGLEVTET SRDISFCAHA INHSGVFIIN DALKDPRFCD NPLVIEPPHI RFYAGYPLTI
HGEYRVGTLC LIGSEPREFS ADDIETLTDL GQMVEAELLS IAQNTLDPLT TISNRRGFEL
LAYQSLASCR RTDAEAALVF FDLDFFKEVN DSFGHRKGDQ VLYDFAHILM AAFRESDVIA
RLGGDEFVVL LSFVQSDSVN FAIERFKLLL AQYNQQHPDQ HPLATSIGVA HWSPESDMSL
EDLLDTADRA MYQNKASHHS PKS
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