Gene Shewmr7_0848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0848 
Symbol 
ID4257109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp965582 
End bp966505 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content46% 
IMG OID638121459 
ProductIS4 family transposase 
Protein accessionYP_736904 
Protein GI114046354 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.133661 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAAAGC CTCGTTATAA AACAACCAAC TGGAAGCAAT ACAACCAAGC CTTAATCAAC 
CGCGGTTCAC TTACCTTCTG GATTGATGAG GATGCAATTG CTAAGTGGAA AGCCAAGGTC
GAGCCGCCCA AGAAAGGTCG CCCTCAATTA TTTAGCGACT TAGCCATTAC CACTGCGTTG
ATGGTTAAGC GTATTTTCTC TATGCCACTG AGAGCCTTAC AGGGCTTTAT CAATTCGGTG
TTTAAACTGG GTGACATCCC ATTATCTTGC CCGCATTACA CCTGTATCAG TAAACGCGCG
AAAACGGTCA ATATTGCTTT TAAAACCAAG ACTCGCGGCG CCATTGAGCA CTTAGCTATC
GACTCGACAG GCTTGAAGGT CTATGGCGAA GGTGAGTGGA AAGTGAAGAA ACACGGCACA
GATGGAAAGC GCAGAGTGTG GCGTAAACTG CATATTGCCG TAGATACACA TAGCCATGAA
ATTATTGCCG CAGAACTCAG TTTATCAGGT GTAACAGACG CTGAAGTGAT GCCCAATTTA
CTTAAGCAAA CCCATCGAAA AATCCGTAAT ATCTCGGGTG ATGGTGCTTA CGACACGAAA
GCTTGTCACG AAGCCGTTCG TCGAAAACGC GCTTTAGTGC TTATTCCACC TAGGGAAGGT
GCTGCGCTAT GGGAACAAGG GCATCCACGA AACTTAGCCG TCAGTTGGCA ACAGCTTCAT
GGCTCAAATA AGCAATGGAA AAAACGGTAT GGTTATCATC GCCGCTCAAT CTCAGAAACC
GCAATGTACA GGATAAAACA ACTGCTAGGA GGCACGTTGA GCATGCGGAA TTATAACGCT
CAGGTGGGAG AAGCTTACGC GATGATTAGG GCTTTGAACA AACTTACTGG GCTAGGTATG
CCTGAAACCC ACTATATAGC TTGA
 
Protein sequence
MSKPRYKTTN WKQYNQALIN RGSLTFWIDE DAIAKWKAKV EPPKKGRPQL FSDLAITTAL 
MVKRIFSMPL RALQGFINSV FKLGDIPLSC PHYTCISKRA KTVNIAFKTK TRGAIEHLAI
DSTGLKVYGE GEWKVKKHGT DGKRRVWRKL HIAVDTHSHE IIAAELSLSG VTDAEVMPNL
LKQTHRKIRN ISGDGAYDTK ACHEAVRRKR ALVLIPPREG AALWEQGHPR NLAVSWQQLH
GSNKQWKKRY GYHRRSISET AMYRIKQLLG GTLSMRNYNA QVGEAYAMIR ALNKLTGLGM
PETHYIA