Gene Shewmr7_0844 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0844 
Symbol 
ID4256637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp960249 
End bp960983 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content52% 
IMG OID638121455 
Producthypothetical protein 
Protein accessionYP_736900 
Protein GI114046350 
COG category[S] Function unknown 
COG ID[COG3821] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.124163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTCT CGCTATTAGA TATTTCTGCA CTGACGTGGT TTATTGTTTC TTGGGCTGGC 
TATACCGCTT TTGCCCGACG TAAGGCGAAG GATACCGACT GTATTGCCCG TGGCCTGCAT
AAGCACCGAA TTTACTGGAT GCTCGAGCTG ATGACTCGAG GCGTGCGCGT TGGCGATGCG
GCGTTATTAG CTAACCTTGA ACGTAATATT GCCTTTTTTG CCTCGACCAC GCTGTTCGTG
CTCGCGGGGG TATTAACCTT ATTTGCGCAG GTTGAACGCC TCGAAGCCGT GATCGCCACT
ATTCCCTATG CTACGCCGCC GAACCACTCC TTAGTCCAAG TGAAGTTGGC GCTATTAGTG
GTGATCTTCG TGATGGCGTT TTTCCAATTT ACCTGGTCGA TGCGCCAATA CGGCTTTGTG
AACGTGATGA TAGGCGCAGG CCCCATGGAT AGCGAAGGCA CCAATGACAA CCTCAAAGCC
TATGCGCGGC AAATGGCGAC GGTGCAAGAT CAAGCCGCCC ATTCCTATAA CTATGGCCTA
CGGGCGTACT ACTTTTCGAT GGCCGTACTC TGTTGGTTCG TACACCCGAT ACTGTTTATT
TTGGCTAGCC TGTTTGTGGT GGTCACCCTG TATCGCCGCG AATTTAAATC CCGCGCCGTA
ATAGCCATTA CCGCCGCCAA GGCACATTTA GGCAGCGAAT ATCAGGCGCG AGAAACCCAG
CGCCAAGCCA AGTAG
 
Protein sequence
MTFSLLDISA LTWFIVSWAG YTAFARRKAK DTDCIARGLH KHRIYWMLEL MTRGVRVGDA 
ALLANLERNI AFFASTTLFV LAGVLTLFAQ VERLEAVIAT IPYATPPNHS LVQVKLALLV
VIFVMAFFQF TWSMRQYGFV NVMIGAGPMD SEGTNDNLKA YARQMATVQD QAAHSYNYGL
RAYYFSMAVL CWFVHPILFI LASLFVVVTL YRREFKSRAV IAITAAKAHL GSEYQARETQ
RQAK