Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0834 |
Symbol | |
ID | 4256627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 947119 |
End bp | 948282 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638121445 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_736890 |
Protein GI | 114046340 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCTG TCAATCAAGA TCGTCGAACA CTGTTAAAAG GGATTGGCGC CGCCACGCTA CTTTGCCCCT TTGCCAGTTT CTCCAGCCTT GCAGCGCCGC GCTCTCGGCG CTTATATATA GATGGTTTAT CCTTTCTGCC CGATGACTTA GCCGATGTTC CCGCATCGGG GCTCGATGCC TTTCTATGTG ATATCTCTGC CATCGAAACC ATTGAACAAG CCGATGGCAC CTTAAACTAC AAACGCACTT ACAAAGCCTG TATGGAAAGC ATCCAGCAAG CCGCGAAACG CGTCAGCGAA CACTCAGACA TTCTCCTACA AGGCTTAACT GGACGCGATA TCAAACTGGC AAGGGAGAGC AATCGCACCG CGGTTTTCTT CCAAATCCAA GGCGCGGATT GCGTTGAAGA AGACAGCGAG GCCAACCAAT GGGCCCGTGT CGATGAGTTT CACCGCCAAG GTCTGCGAGC ACTGCAGCTG ACCCACCATT ACGGCAATAC CTTTGCGGGC GGCGCCCTCG ATAACGATGC CAATGGCGGG CTCAATAAAC CTCTTACCGC CCATGGCCGT GCACTGATTG AAAAACTCAA TCATGCCAAT ATCTTAGTCG ATGTCAGCCA CTCGAGCGCC CAAACCGCGT TAGATGCTGC CAAACTCAGC CGCGCGCCCA TAGTCCAAAG CCATGGCGCG GCGCGTGGTA TTGTCAAACA TGCCCGTTGT AGCCCCGATG AAGTGATCCG CGCCATTGCC GACTCAGGCG GCGTATTCGG GGTCTTTATG ATGAGCTTTT GGCTCACCAA TAATGCCGTT CCAACTGTCG ATGACTATAT CCGCCAGTTA GAATATGTCG CCCGAGTCGG TGGGGTCGAT TGTGTTGCCA TCGCCAATGA TTATCCGCTC AGAGGCCAAG AAAATCTGTT AGCCCTGAAT AACGACAATG CCCAAGGCGT GAAGGAATAT CAGGAATGGT GGTACAGCCT AAGGGCTAAA AAAGTGTTAG GTTTTGATGC AGAACCAAGA CATGTGGTCA TTCCCGAACT AAACCATATC GAGCGTATGA GCCGGATCGA CGATGCATTA GCTAAGGCCC GTTTTAAGTC GACCGATCGC GACCGCTTTA TGGGCGGAAA CTGGCAAAGA GTACTCAATC AAGTACTCAT CTAA
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Protein sequence | MKAVNQDRRT LLKGIGAATL LCPFASFSSL AAPRSRRLYI DGLSFLPDDL ADVPASGLDA FLCDISAIET IEQADGTLNY KRTYKACMES IQQAAKRVSE HSDILLQGLT GRDIKLARES NRTAVFFQIQ GADCVEEDSE ANQWARVDEF HRQGLRALQL THHYGNTFAG GALDNDANGG LNKPLTAHGR ALIEKLNHAN ILVDVSHSSA QTALDAAKLS RAPIVQSHGA ARGIVKHARC SPDEVIRAIA DSGGVFGVFM MSFWLTNNAV PTVDDYIRQL EYVARVGGVD CVAIANDYPL RGQENLLALN NDNAQGVKEY QEWWYSLRAK KVLGFDAEPR HVVIPELNHI ERMSRIDDAL AKARFKSTDR DRFMGGNWQR VLNQVLI
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