Gene Shewmr7_0833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0833 
Symbol 
ID4256626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp945887 
End bp947059 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content53% 
IMG OID638121444 
Producthypothetical protein 
Protein accessionYP_736889 
Protein GI114046339 
COG category[R] General function prediction only 
COG ID[COG4637] Predicted ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCA CCCTAGCCAT CTCTAACTAT CGTACCTTGA GGGAGATAGT CTTACCCCTT 
GGGCGCTTAA ACTTAGTGAT CGGCGCTAAC GGTAGTGGCA AATCCAATTT ATACAAAGCG
TTACGACTAC TCGCTCAAAC AGCGCAGGGT GGCGTTGTTA ATGCTTTGGC TCATGAAGGC
GGCTTAGACT CCTGTTTTTG GGCTGGTCCA GAAAATCTCA CCAAGGGCAT GTTAGCGGGC
GATACGCCAA TTGAAGCAAC GGTCAGACAA GCGCCAAAAC GCCTAAAACT CGGATTTGCG
GGCGAAGATT TTAGTTATCT GATCGAGCTT GGCCTCCCCA AACCCGACTC CACCACCCTA
TTTGGATTAG ATCCGCAAAT TAAACGTGAG GCGATTTGGA ATGGCCCCAA ATATCGCTCC
GCCAGCGTGT TGGTGGAGCG GCGCGGTCCT ATGGTGAAGA GTCGCAGCCC TGAGGGACAA
GGTTGGCTCA CCTTGAGCGC CCATCTGCAA AGCGGTGACA GTATTTTTAC CGAACTTGCC
GATCCTGAAC GTAGCCCTGA AGTATTAACG CTAAGGGACA GCATTCGCGC CTGGCGCTTT
TACGATCATT TTCGAACCGA TGCCGAAGCC CCGGCGCGTC GTCCGCAGCT CGGGACGGCC
ACGCCCGTAT TGCACCATGA CGGTCGAGAT CTCCCCTCTG CCATACAAAC TATTTTTGAG
ATTGGCGACA AAGCCGCATT CGATCATGCT GTGACCGATG CTTTTCCGGG GGCCAAGGTG
CGTATCACGC CCCAAGCGGG CGGGATACTC CAACTCGAAT TCCACCAGCA GGGCTTATTA
AGACCACTAC ATGCCAGTGA ACTCTCCGAC GGCACCCTGA GGTATTTATT GCTTATTGCC
GCATTACTCA CCCCAAGGCC ACCCGAGCTA ATGGTATTAA ATGAGCCAGA AACCAGCCTG
CACCCCGACT TATTGCCCGC TTTGGCTCGG CTTATCGCCA AGGCTTCCGA GGTTTGTCAG
CTTTGGGTCG TGTCCCACGC TAACCGCTTG ATTAATGCCT TGAGCCAGTT TGAGCACTGC
AATACTTTGG CACTGGATAA AAATCTAGGG CAAACCCAAA TCGTGGGGCA GGATTTACTC
AATACGCCGA GCTGGCAATG GCAACTCAAA TAG
 
Protein sequence
MLTTLAISNY RTLREIVLPL GRLNLVIGAN GSGKSNLYKA LRLLAQTAQG GVVNALAHEG 
GLDSCFWAGP ENLTKGMLAG DTPIEATVRQ APKRLKLGFA GEDFSYLIEL GLPKPDSTTL
FGLDPQIKRE AIWNGPKYRS ASVLVERRGP MVKSRSPEGQ GWLTLSAHLQ SGDSIFTELA
DPERSPEVLT LRDSIRAWRF YDHFRTDAEA PARRPQLGTA TPVLHHDGRD LPSAIQTIFE
IGDKAAFDHA VTDAFPGAKV RITPQAGGIL QLEFHQQGLL RPLHASELSD GTLRYLLLIA
ALLTPRPPEL MVLNEPETSL HPDLLPALAR LIAKASEVCQ LWVVSHANRL INALSQFEHC
NTLALDKNLG QTQIVGQDLL NTPSWQWQLK