Gene Shewmr7_0822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0822 
Symbol 
ID4256858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp931325 
End bp931855 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content47% 
IMG OID638121433 
Producthypoxanthine phosphoribosyltransferase 
Protein accessionYP_736878 
Protein GI114046328 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0634] Hypoxanthine-guanine phosphoribosyltransferase 
TIGRFAM ID[TIGR01203] hypoxanthine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACA CCACCGAAGT GATGATCTCC GCCGAAGAGA TCAGCCAAAA ATTGGATCAA 
ATGGCCGAGC AAATCAATGC CCACTATGCC AACAGCGAGC GTTTGCTGAT GGTGGGATTG
TTAAAAGGTT CAGTCGTATT TATGGCTGAT CTGTGCCGCC GTATTAAAGG CCATGTTGAA
ATCGATTTTA TGTCGGTTTC GAGCTATGGC AATGCCATGA CCAGCTCACG GGATGTGAAA
GTGCTGAAGG ATGTGCAATC GGATATCGCG GGCCGCGACG TGCTGATTGT GGAAGACTTA
ATTGACTCGG GCAACACTTT AAACAAAGTG CGCGAAATGC TGTTATTGCG TGAGCCAAAG
AGCTTAGCCC TGTGCACTCT GTTGGATAAA CCCGAACGCC GTGAAGTGGA TGTTAAAGTC
GACTTTATCG GTTTTACGAT CCCAGACGAG TTTATTGTGG GTTACGGCAT CGATTATGCT
GAGCAATACC GCAACTTGCC TTATATCGCC AAAGTAGTAC CGCTCGAATA G
 
Protein sequence
MKHTTEVMIS AEEISQKLDQ MAEQINAHYA NSERLLMVGL LKGSVVFMAD LCRRIKGHVE 
IDFMSVSSYG NAMTSSRDVK VLKDVQSDIA GRDVLIVEDL IDSGNTLNKV REMLLLREPK
SLALCTLLDK PERREVDVKV DFIGFTIPDE FIVGYGIDYA EQYRNLPYIA KVVPLE