| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0818 |
|---|
| Symbol | |
|---|
| ID | 4256854 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 927395 |
|---|
| End bp | 928258 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638121429 |
|---|
| Product | sterol desaturase family protein |
|---|
| Protein accession | YP_736874 |
|---|
| Protein GI | 114046324 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3000] Sterol desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATATCG CCGCGTTAAT CAATCACCCC GAGGTGTTGC TGCTGGTATT GGCTCCACTG
TTTTTTGTCT GCATTTTGCT GGAATGGTAT TTCGGCGACA GAAGACAAAA ACTGCCAGTG
AGTGCCCGTT ACCACACGAA GGAAGTGCTG TGTAATTTTA GTCTCGCCGC CATGCACCAA
GGCGCGGATA TCCTCATGGG TTTGCTGATC GCTAAGTTGT ACCTAGCGGT ATTTGGTTGG
AAATTATTCG ATATTCAAAT GGGTCCACTC AGCTTTGTGC TGCTGATGAT TGCCCAAGAT
TTTTGCTATT ACTGGTTCCA CCGTGCGAGC CATAGAGTGC GGTGGATGTG GGCGGCCCAT
GTGGTGCACC ACAGCTCGGA AAATATGAAC TTCAGCACCG CGTTTCGCCA GAGTTTGATG
TATCCCTTTG CTGGTATGTG GGTGTTTTGG TTGCCGCTGG TGATCTTAGG CTTCGACCCT
AATTGGGTGG TATTTGTGGT ACTGCTAAAC TTGGGATTAC AGTTTTTTGT GCATACCCAA
GCGATCAGAA AACTTGGTCC CTTAGAATGG CTGTTTAATA CGCCTTCCCA CCACAGGGTG
CACCATGGGC GAAATCCACA ATATATCGAT AAAAATTATG CCGGTATTTT GATCATCTGG
GACAAACTCT TCGGTACCTT TGTACCCGAG GGCGAGACAG TGATTTACGG GATCACTAAA
CCTGTCAACA GTTTTAATCC ACTTAAAGTG ACCTTTAGCG AATGGCGCGA TATGTTCAGC
GAGGTGACGG CGCGGGGGCT GACATTCACG GAGCGATGTA AAATCCTCTT CGCGCCCCCT
GCCAGTCAGC AAAAGGATGA GTGA
|
|---|
| Protein sequence | MDIAALINHP EVLLLVLAPL FFVCILLEWY FGDRRQKLPV SARYHTKEVL CNFSLAAMHQ
GADILMGLLI AKLYLAVFGW KLFDIQMGPL SFVLLMIAQD FCYYWFHRAS HRVRWMWAAH
VVHHSSENMN FSTAFRQSLM YPFAGMWVFW LPLVILGFDP NWVVFVVLLN LGLQFFVHTQ
AIRKLGPLEW LFNTPSHHRV HHGRNPQYID KNYAGILIIW DKLFGTFVPE GETVIYGITK
PVNSFNPLKV TFSEWRDMFS EVTARGLTFT ERCKILFAPP ASQQKDE
|
|---|
| |