| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0815 |
|---|
| Symbol | |
|---|
| ID | 4256851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 924798 |
|---|
| End bp | 925376 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638121426 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_736871 |
|---|
| Protein GI | 114046321 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3056] Uncharacterized lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATCCC CCATGAAAAA GTTATTATTG ACGCTGACTT TCCCCCTGCT CTTCGTGGGC
TGCGCGAGCC AAAATCCGAC TCATATGGCA TTCAGCCCTC AGGTTCCCGA TATTAGCCAA
CAGACTGCCA GACCCGTACA GATCTCATTG GATACCATTG ATACCCGTAA CGTCGAGTAC
GTGGCGCGTT TTATCGAAGA AGGCACTAAG ACTCGCCTCG TCGGCCCGAG TGAGCCACCA
AAATTATTGC TCGATGAAGT TTTCCGTAAC GGTTTTACTC AAGCGGGCTA CCAGATTGAC
CCAAGCGCGA CCAACTCAGT GCAAGTTCAG TTAGAAGAAC TGCAAATGGA TGTCACCAAA
AAGACCTTCG GTTACGAGGC CAAACACAGC GTGCTGATTG CCGTGCAAGC CCGTAACTCC
AGTCAAGAAT TGGTCAAACG CTACAAAGCC AAGGGCACCT TAAAAGGCCC GTTAACGCCA
GACTTTGCCA CTCTAGAGCT GGATATGAAC AAGTTACTCG GTCAGCTCAC AGGGGAAATT
TTGAATGACC CTGAGTTAAA CCAGTTCCTG CAACAATAA
|
|---|
| Protein sequence | MRSPMKKLLL TLTFPLLFVG CASQNPTHMA FSPQVPDISQ QTARPVQISL DTIDTRNVEY
VARFIEEGTK TRLVGPSEPP KLLLDEVFRN GFTQAGYQID PSATNSVQVQ LEELQMDVTK
KTFGYEAKHS VLIAVQARNS SQELVKRYKA KGTLKGPLTP DFATLELDMN KLLGQLTGEI
LNDPELNQFL QQ
|
|---|
| |