| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0802 |
|---|
| Symbol | |
|---|
| ID | 4256403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 913566 |
|---|
| End bp | 914813 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638121414 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_736859 |
|---|
| Protein GI | 114046309 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5505] Predicted integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGCA CGGCATTAGT CACCAATGAC GCGGTGGCGC TGGGAATATT GGCAACGATT
CTGGGATTTG TGTTTTATAC CAGTAGTAGT AGCCATCCAT TTTGGCAAAA GTTTTACCGT
TTTATCCCCG CGTTATTACT CTGCTATTTC TTGCCATCGT TGTTGAATAC CTTTGGGGTG
ATCGATGGTG GCACATCGCA GCTTTACTAT GTGGCCTCGC GTTATCTATT GCCGGCCTGT
TTGGTGCTAC TGATTTTAAG TGTGGATTTA AAAGCCATCT TAGGACTAGG GCCTAAGGCG
GTGATCATGT TTTTAACTGG GACTGTCGGC ATTGTGATCG GCGGGCCGAT TGCACTGCTC
GTAGTGTCCT TTATCGAACC CTCATTGATT GGTGTCGATA GCCCTGATGC GGTGTGGCGT
GGCATGACAA CCCTCGCGGG CAGCTGGATT GGCGGCGGTG CGAACCAAGC CGCGATGAAG
GAAATTTATG AAGTGGGCGG CAATATCTTC TCTGTGATGG TGACAGTTGA TGTGATTGTG
GCCAATATTT GGATGGCGGT TTTGTTGTTT ATGGCATCAA AAGCCAAAGA AATCGATGCC
AAGACAGGTG CTGATACCAC AGCAATTGAG ACCTTAAAGA ACAAGGTTGA GCAGTATCAT
GCTGAAAATG CACGTATTCC AAGCCTGCGT GATCTGATGC TGATTGTGGC CGTCGGTTTT
GGGATTACGG GAGTGGCCCA TATTGCCGCC GATTTCCTCG GTCCTTATTT TGAGGCCAAC
TATCCTTGGA CTGAGGATTA CAGCTTAACC TCTAAGTTCT TCTGGTTAGT GGTGATTGTG
ACCACCATAG GTTTAGCCAT GTCCTTTAGC CCTATGCGCC ATTTAGAGGC GGCGGGGGCT
TCTAAGGTGG CGTCGGCATT CTTGTATATT TTGGTGGCGA CCATTGGTTT ACATATGGAT
GTAAGCAAGG TCCTTGATAC GCCGCTATAT TTTTTAGTGG GCATTATTTG GATGATAGTG
CACGCTGGCT TTATGCTATT GATTGCTAAG TTAATTAAGG CTCCTTTGTT TTATATGGCC
GTGGGCAGTC AGGCAAACGT GGGAGGGGCT GCATCGGCGC CAGTTGTGGC AGCGGCGTTC
CACCCAGCTT TAGCCCCTGT AGGGGTATTA TTAGCCGTAT TTGGTTATGC GCTAGGCACT
TATATGGCGT GGCTCTGCGG TCAGTTACTG CAAGCCGTCG CGGTATAG
|
|---|
| Protein sequence | MASTALVTND AVALGILATI LGFVFYTSSS SHPFWQKFYR FIPALLLCYF LPSLLNTFGV
IDGGTSQLYY VASRYLLPAC LVLLILSVDL KAILGLGPKA VIMFLTGTVG IVIGGPIALL
VVSFIEPSLI GVDSPDAVWR GMTTLAGSWI GGGANQAAMK EIYEVGGNIF SVMVTVDVIV
ANIWMAVLLF MASKAKEIDA KTGADTTAIE TLKNKVEQYH AENARIPSLR DLMLIVAVGF
GITGVAHIAA DFLGPYFEAN YPWTEDYSLT SKFFWLVVIV TTIGLAMSFS PMRHLEAAGA
SKVASAFLYI LVATIGLHMD VSKVLDTPLY FLVGIIWMIV HAGFMLLIAK LIKAPLFYMA
VGSQANVGGA ASAPVVAAAF HPALAPVGVL LAVFGYALGT YMAWLCGQLL QAVAV
|
|---|
| |