| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0794 |
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| Symbol | ipk |
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| ID | 4256395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 906586 |
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| End bp | 907440 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638121406 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_736851 |
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| Protein GI | 114046301 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0030636 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.782101 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGAATG AGATTTCACG CAATTGGCCC GCGCCCGCAA AATTAAATCT GTTTTTGCAT
ATCAACGGGC GCCGCGCCGA CGGTTACCAT GAGTTGCAAA CCCTGTTTCA ATTTATCGAT
TGTTGCGATC TGCTCGACTT TAGGGTGACG CAGACGCCAG AGCTGATATT GCACTCGGAC
ATGTCGGCCG TTGTCGCGGA TAGCGATAAC TTAATTCTGC GAGCCGCAAA ATCATTACAG
CAAGCAACAG GCTATCCCGG CGGCGCCGAA ATCTGGCTTG AAAAACGTTT ACCTATGGGC
GGCGGTTTAG GCGGCGGTTC CTCCGATGCG GCCACTACAC TCGTGGCGTT AAATCAGTTG
TGGAACACCC AATTATCTAA CGATGAATTA GCCACAATTG GTTTAAAACT CGGTGCCGAT
ATCCCTGTTT TTATTCGCGG TTTCGCGGCA TTTGCCGAAG GCGTTGGCGA ACGTTTACAG
GCGGTGACGC CCACTGAATT TTGGTATTTA GTGATAGCGC CCGATGCCCA TGTTTCCACC
GCAGCTGTGT TCCAAGATCC TTTGCTACCC CGCAATACAC CTAAGCTTGG CATCGACACG
TTAATGAGCC AACCTTGGGC AAATGATTGC CAAGATCTGG TCGTTTCCAA ATACCCTCAA
GTTGCCAAGG CCTTAGGCTG GCTGTTAGAA TATGCGCCGT CGAGAATGAC CGGAACGGGC
GCATGCGTGT TTGGGGAGTT TTCTTCGCAG CAGCAAGCTC TCGCAGCCTT GGCGAAATTA
CCGTCTGATA TGCAAGGATT TGTTGCAAAA GGGATGAATA TTTCGCCGCT CATAGTGCGA
CTCAATCATC CATAA
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| Protein sequence | MSNEISRNWP APAKLNLFLH INGRRADGYH ELQTLFQFID CCDLLDFRVT QTPELILHSD
MSAVVADSDN LILRAAKSLQ QATGYPGGAE IWLEKRLPMG GGLGGGSSDA ATTLVALNQL
WNTQLSNDEL ATIGLKLGAD IPVFIRGFAA FAEGVGERLQ AVTPTEFWYL VIAPDAHVST
AAVFQDPLLP RNTPKLGIDT LMSQPWANDC QDLVVSKYPQ VAKALGWLLE YAPSRMTGTG
ACVFGEFSSQ QQALAALAKL PSDMQGFVAK GMNISPLIVR LNHP
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