Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0779 |
Symbol | |
ID | 4257216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 889227 |
End bp | 889697 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638121391 |
Product | hypothetical protein |
Protein accession | YP_736836 |
Protein GI | 114046286 |
COG category | [S] Function unknown |
COG ID | [COG4807] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.023877 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCATGA TTAACAATGA TATTTTGCGC CGTTTGCGCT TCGTGTTTGA TTTCAACAAT GCCAAAATGA TTAAGATCTT TGCCAAAGTT GGAAGAGAAG TGCCAACCGA AGAGATGATT AGTCTACTGC GCAAAGAAGA GGAAGAAGGC TATAAGGCCT GTAACGATAC GACCCTATGT CAGTTTTTAG ATGGCCTTAT CATCGAAAAA CGTGGTTTAC GCGAAGGGGC TGAAATCCCA AAACCAGTTT CAAAATTAAA CAACAACTTA ATCTTCAAAA AGTTACGTGT AGCCCTAGAA ATGCGTGAAG AAGATATTGT GGCCACCTTA GCACTCGCCG AAGTACAAAT GTCTAAGTCT GAATTAAGTG CGCTGTTTCG CAACCCAGAT CATAAAAACT TCAAGGCCTG TGGCGATCAG ATCCTGCGTA ACTTTATCCG TGGCCTATCG CTAAAATATC GCGGAGTCTA A
|
Protein sequence | MTMINNDILR RLRFVFDFNN AKMIKIFAKV GREVPTEEMI SLLRKEEEEG YKACNDTTLC QFLDGLIIEK RGLREGAEIP KPVSKLNNNL IFKKLRVALE MREEDIVATL ALAEVQMSKS ELSALFRNPD HKNFKACGDQ ILRNFIRGLS LKYRGV
|
| |