Gene Shewmr7_0779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0779 
Symbol 
ID4257216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp889227 
End bp889697 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content42% 
IMG OID638121391 
Producthypothetical protein 
Protein accessionYP_736836 
Protein GI114046286 
COG category[S] Function unknown 
COG ID[COG4807] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.023877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGA TTAACAATGA TATTTTGCGC CGTTTGCGCT TCGTGTTTGA TTTCAACAAT 
GCCAAAATGA TTAAGATCTT TGCCAAAGTT GGAAGAGAAG TGCCAACCGA AGAGATGATT
AGTCTACTGC GCAAAGAAGA GGAAGAAGGC TATAAGGCCT GTAACGATAC GACCCTATGT
CAGTTTTTAG ATGGCCTTAT CATCGAAAAA CGTGGTTTAC GCGAAGGGGC TGAAATCCCA
AAACCAGTTT CAAAATTAAA CAACAACTTA ATCTTCAAAA AGTTACGTGT AGCCCTAGAA
ATGCGTGAAG AAGATATTGT GGCCACCTTA GCACTCGCCG AAGTACAAAT GTCTAAGTCT
GAATTAAGTG CGCTGTTTCG CAACCCAGAT CATAAAAACT TCAAGGCCTG TGGCGATCAG
ATCCTGCGTA ACTTTATCCG TGGCCTATCG CTAAAATATC GCGGAGTCTA A
 
Protein sequence
MTMINNDILR RLRFVFDFNN AKMIKIFAKV GREVPTEEMI SLLRKEEEEG YKACNDTTLC 
QFLDGLIIEK RGLREGAEIP KPVSKLNNNL IFKKLRVALE MREEDIVATL ALAEVQMSKS
ELSALFRNPD HKNFKACGDQ ILRNFIRGLS LKYRGV