| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0772 |
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| Symbol | |
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| ID | 4255845 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 882142 |
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| End bp | 882858 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638121384 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_736829 |
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| Protein GI | 114046279 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.025527 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCGCA TGCGCTTAGT GACAGAGGCT TGGCCTCCAA TGAGTTTTGA GCAAGAGGGG
GTGCCTACTG GTTTTGGTGT TGAGTTGGTC AATCAATTGC AAACTCGCCT TGGGCTGCGG
GAAAAAATCG AAGTCTTACC TTGGGCGCGG GCCTACTCGA TTGCTAATTC TGCACCTAAT
GTGTTGTTGT TCGCCACTTC CATCAGCGAT GAGCGGGAGA GCCATTTCGA TTTTATTGGC
CCCATTGCCA CCAGTAAAAT TACCCTCTAC GCCAGAGCTG GCGATCAAAT TAATATCAAT
AAGTTGTCAG ACGTCAGTGC CGCGGGGATT GTTGGTGTTT ATCGTGAGTC CGTGGGCGCG
CAACTATTGC AGCAGCTGGA TGTAGAGCCA TTGTTAGTGG CGAGTTTTCC GCAGCAATCG
GCAAAACAGT TGTTATTTTC ACGGGTGCGA TTCTGGTGTC AGGCCGATTT AGCGGTCAAG
CATATACTGC AAGATATCGG CGCGAAGGAA TCGGATATCA AACCCGTTTA TGTTATCTCT
GAAATCCATC TTTATCTGGC TTTCTCAAAA GGAACGTCTG CGGACACAGT CCAGCGTTGG
CAAGCCGAGT TAGAAAAATT CAAGGAGTCG GGGGACTTTG CTCGGCTCTA TCAAAAATGG
TTTGGCGCCT TACCGCCACC CCTCGAGCAT CAAATCTTTT GGCATCGAAA TACTTAA
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| Protein sequence | MERMRLVTEA WPPMSFEQEG VPTGFGVELV NQLQTRLGLR EKIEVLPWAR AYSIANSAPN
VLLFATSISD ERESHFDFIG PIATSKITLY ARAGDQININ KLSDVSAAGI VGVYRESVGA
QLLQQLDVEP LLVASFPQQS AKQLLFSRVR FWCQADLAVK HILQDIGAKE SDIKPVYVIS
EIHLYLAFSK GTSADTVQRW QAELEKFKES GDFARLYQKW FGALPPPLEH QIFWHRNT
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