Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0764 |
Symbol | |
ID | 4255837 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 872250 |
End bp | 873881 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638121375 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_736821 |
Protein GI | 114046271 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.757334 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000343256 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCTGACAT TCTTTAGTCA ATTTATTAAA AGTCCGATAG GCAGGCATCT CACCTTGTCT ATCGTGCTCT TTAGCTCCTT GATTACCTTA ATGACCACTG CCTACCAATT GGTTAACGAC TACCGCGGTG ATGTCACTCG AATCGACCGT GTTTTCTCCA ATATTGAAAA AGCCAATCTC GATGTCCTCG CCGCCAGTAT CTGGGTCATA GATGAGAGAC TAATTAATAC TCAGTTGAAT GGTCTTATCC AACTGCCTGA TATCAACTAT ATTTCAATCA AAGACGACAG TGGCCAGGCG TGGAATTCTG GTGCCCAAAA ACAAACCCAT ACACTCAGTA AAACCTTTCC TCTGGTGTAT AAGTCACCTA CGGATAATAT CAATGTCGGC AGTTTAGAAG TGCAAGTGGA TATGGATGCT ATCTATCAAC GCCTCTACGA TAAAGCCATC CTTATTCTGC TATCCAATGG TATTAAAACC TTCCTAGTGG CTGGATTTAT TCTATTTTTG GTCTGGTACA ACATCACTAA ACACTTAGAC AAACTCAGTA ATTACTGTAA GCGCATCGAT CTCGATAGCG ATGTGGAACC ATTAGACTTC GATCGCAAAC AAAAACTCGA TGAATTTACC CAAGTAGCCG ATGCCATCAA TAGCATGCAG GCACAATTAC GCGGCTCATT TGAAGCTCTC AAACGTTCCA AAGCCGAACT GCAAACCTCC TTAGAAGACA GAGAACGTTT ATTGAAACTT GAGCGCAGCT ATAAGGAAGA ACTTGCACGA CAAGTCAAAG AAAGAACTCA GGAATTAGAA CAGTCATTAA CAGCGCTAAA ACGAGCGCAG CAAGTATTAG TCGAGCAGGA AAAAATGGCG GCATTGGGCG GGCTCGTTTC AGGGGTTGCC CATGAGATCA ATACGCCGAT CGGCATTTGT TTGACGGCGG CTAGCGCGCA ATTGAGTCAT ATCGAGGAGC TTATAGACCT CATTCACAGC GAACATGCCA CTCTCGACGA GATTAATGCG ATTTTAGATG AGTACCAAGA AAGCTGTGAG CTGATAGTCC GTAATATCAC CAAGGCCAGT AGTCTTATCC AAAAATTTAA AACGATCGCC ATCGATCGTA GCCATGAAGA ACATCAATGC ATCAATTTAA AAAGTCAGCT GCAGGAGATT TTAGAATCTA CTTTAATCAT GTATCCCAAG TTAAAAGCGC AAACCCAATT AGAGGTTGAG CCAGCGCTCA ACATCCAAAC CAATGTTAGC CTGCTCAATC AAATCGTCAG CAATATTCTC TCCAACGCCT TCACCCATGC CTTCCAAGAT AGGGAAAATA ATCAAATTCA GATTTCGGCC AAGTTAGAGC AAGGCTATGT AAATATCAGC ATCGAAAACA ATGGTATCGC CATTCCGCCT GAAGTGGCAG AACATATGTT TGAGCCCTTC TTTACCACCA ACAGGAGTAA AGGGGGCACT GGATTAGGCT TATCCGCCGC CTTTAATGCC GCCACACTGC TAAAGGGCAC CATGAATTAC CAAGCAGACT CAACACTGGG AGGGGCCAAA TTCAATATCC GTATTCCCCT TACCCAATGC GATGCACCTA AACTGACCAC ACACCATGAC TTTACAATTT GA
|
Protein sequence | MLTFFSQFIK SPIGRHLTLS IVLFSSLITL MTTAYQLVND YRGDVTRIDR VFSNIEKANL DVLAASIWVI DERLINTQLN GLIQLPDINY ISIKDDSGQA WNSGAQKQTH TLSKTFPLVY KSPTDNINVG SLEVQVDMDA IYQRLYDKAI LILLSNGIKT FLVAGFILFL VWYNITKHLD KLSNYCKRID LDSDVEPLDF DRKQKLDEFT QVADAINSMQ AQLRGSFEAL KRSKAELQTS LEDRERLLKL ERSYKEELAR QVKERTQELE QSLTALKRAQ QVLVEQEKMA ALGGLVSGVA HEINTPIGIC LTAASAQLSH IEELIDLIHS EHATLDEINA ILDEYQESCE LIVRNITKAS SLIQKFKTIA IDRSHEEHQC INLKSQLQEI LESTLIMYPK LKAQTQLEVE PALNIQTNVS LLNQIVSNIL SNAFTHAFQD RENNQIQISA KLEQGYVNIS IENNGIAIPP EVAEHMFEPF FTTNRSKGGT GLGLSAAFNA ATLLKGTMNY QADSTLGGAK FNIRIPLTQC DAPKLTTHHD FTI
|
| |