Gene Shewmr7_0763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0763 
Symbol 
ID4255836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp871286 
End bp872104 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content50% 
IMG OID638121374 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_736820 
Protein GI114046270 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.568059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000213544 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACTGAAG CCTATCAGAA TCGCTTTGGT GGCATTGGCC GCTTGTACGG GCAAAAGGCA 
CTCGCTCAAT TTGCCGCTTC CCATGTGGTG GTGATTGGCA TTGGTGGCGT TGGCACATGG
GCGGCGGAGG CGTTGGCACG CAGTGGTATT GGCCAAATCA CTCTGATTGA TTTGGATGAT
ATCTGCGTGA CTAATACTAA CCGTCAAATT CATGCTCTGA CATCGACGAT CGGTGAGTCT
AAAGTGGCTG TGATGGCGCA GCGGATCCGC TCGATCAATC CCGATTGCCA AGTCAATGAA
GTGGAAGACT TTATTACTGT CGATAACCTT GGTGAGTATT TGCTCGGGTC AAAAGCGGGT
GGCAATATCG GTTATGTGGT TGATTGTATT GACGCCGTTA AGCAAAAGGC AGCACTGATT
GCTTGGTGTA AACGTCAAAA AATCAAGATA GTGACAGTTG GTGGTGCGGG CGGGCAAACG
GATCCTACGC AAATTCAATT AACCGATCTG GCGAAAACTT ATCAAGATCC TTTACTGGCC
AAAGTGCGTA ATATTTTGCG CCGTGAATAT AACTTCTCTA AAAATGTGCA GCGCCGTTTT
GCTGTTGATG CGGTGTTTTC CAGCGAGCAG TTAGTTTATC CCCAAGCCGA TGGTTCCGTG
TGCAGCAGCA AGGCGACGGC CGATGGCTCT ATGCGTATGG ATTGTGCCTC TGGCTTTGGT
GCCGTCACTA TGGTGACTGG GACTTTTGGA TTTGTGGCGG CGAGCCGGGT ACTTGCTAGG
CTCGCCCAAC TTGCAAATGA ACCAGGGGCG AGCGAATAA
 
Protein sequence
MTEAYQNRFG GIGRLYGQKA LAQFAASHVV VIGIGGVGTW AAEALARSGI GQITLIDLDD 
ICVTNTNRQI HALTSTIGES KVAVMAQRIR SINPDCQVNE VEDFITVDNL GEYLLGSKAG
GNIGYVVDCI DAVKQKAALI AWCKRQKIKI VTVGGAGGQT DPTQIQLTDL AKTYQDPLLA
KVRNILRREY NFSKNVQRRF AVDAVFSSEQ LVYPQADGSV CSSKATADGS MRMDCASGFG
AVTMVTGTFG FVAASRVLAR LAQLANEPGA SE