| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0760 |
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| Symbol | |
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| ID | 4255833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 865875 |
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| End bp | 868151 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638121371 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_736817 |
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| Protein GI | 114046267 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000176508 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000384716 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGACG CGATCAAGTT AAGCTTAGAT GGCGTAGAGC AGATGCCCCT GCGGCGCTTT
ACCGAAGAAG CTTATCTGAA CTATTCCATG TACGTCATCA TGGACCGAGC CTTGCCCCAT
ATTGGTGACG GGCTTAAGCC AGTGCAGCGG CGGATTATTT ATGCCATGAG TGAGCTAGGT
TTATCGGCTC AGTCAAAACA TAAAAAATCA GCTCGTACCG TCGGTGACGT ACTCGGTAAG
TACCATCCCC ATGGCGACAG TGCCTGTTAT GAGGCTATGG TACTGATGGC GCAGCCATTT
TCATACCGTT ATCCCTTGGT CGATGGCCAA GGTAACTGGG GGGCGCCAGA CGATCCTAAG
TCCTTCGCCG CGATGCGTTA TACCGAGGCG CGCCTGTCTA AGTTCTCCGA AGTATTATTG
TCTGAGTTAG GACAAGGTAC GGTCGAATGG GGCGCTAACT TCGATGGCAC CCTGAAAGAA
CCTAAAGTGT TGCCCGCACG TTTGCCGCAT ATTTTACTCA ATGGCATCAC CGGGATTGCG
GTGGGTATGG CGACGGATAT TCCACCCCAT AACGCCAGAG AGCTAGTCAA TGCCTGCGTG
GCCTTGCTTG ATGATCCTAA ACTGGAGCTG GAGCAGTTGA TGGGCTACGT GCCAGGGCCT
GATTATCCGA CTGAAGCCGA GATCATCACC CCGTCTGCCG ACATTGCCAA AATCTATGAA
ACGGGTCGCG GTTCCTTAAA AGCCCGCGCC GTGTATAGCG TCGAAGCCGG TGAGATAGTG
ATCACTGCAC TACCACATCA AGCCAGCAGC GGTAAGATTT TAGAGCAGAT CGCCGCGCAG
ATGCAGGCGA AAAAATTGCC TATGGTGGCG GACTTACGTG ATGAATCTGA CCATGAAAAC
CCTGTGCGAT TGGTGGTGGT GCCGCGTTCC AATCGCGTCG ATTGCGATCA ACTGATGGCG
CACTTGTTTG CGACCACAGA TCTTGAGAAA AGCTTTAGGG TAAACCTGAA CGTCTTGGGC
CTAGATGGTC GTCCACGCGT CAAAGGATTA AAAGAGCTAT TAACCGAATG GTTAGAGTTC
CGTGTCGATA CCGTAAGACG TCGTCTCGAG TATCGCCTCG ATAAAGTCTT AGCAAGGTTA
CATATCCTCG AAGCCTTGAT GATCGCCTTC CTCAATATTG ATGAAGTGAT TGAAATCATT
CGTTTCCACG ATGAGCCAAA GGCCGAGTTA ATGGCGCGCT TTAACCTGAC GGATAGGCAA
GCCGAAGCCA TCCTCGAGTT AAAATTACGT CATTTAGCCA AGTTAGAAGA GTTTAAAATC
AAGGCCGAGC AGGATGAGCT TGAGGCCGAG CGTGAGAAAT TAGAACAGTT ATTGAGTTCT
GAACGCCGCT TAAAAACCTT GATCAAGAAA GAATTAATTC AAGATGGCGA AACCTATGGC
GACGATCGCC GCTCACCGAT TGTTGAGCGC CATGAATCCC GTGCCTTAAC CGAGCAGGAG
CTGACGCCGA GCGAGCCAGT GACTGTGGTG TTATCTGAAA AAGGCTGGGT GCGTTGCGCT
AAGGGCCATG ATATCGACGC CGAGTCCTTA TCCTATAAGG CGGGCGATCA ATATCTGTGT
AGTGCGATGG GGCGCAGTAA TCAGGCGGCG GTATTTATTG ATTCATCGGG CCGCGCCTTT
GCGACCGACA GTCACAGCCT GCCATCGGCG AGGAGCCAAG GCGAGCCAAT CACCACGCGC
TTTAATATGG CGCCGGGTGA AACCATGCAG CACGTGATTT TGGGTGAAGA CGAACAATGT
TTCCTGCTCG CCACCGATGC AGGTTACGGT TTTATCTGTA CTTACAATGA TATGGTGTCA
CGTAACAAGG CGGGGAAAGC CCTGTTAAGC CTACCGCCGA ATGCCAAGTC CTTACCGCCG
AGACTAATTG ACCGCAGCCG CGAGATGTCT ATCTTAGCGA TCACCAATGA AGGGCGTATG
TTGCTGTTTT CATTAGAAGC ATTACCGCAG TTGTCTAAGG GTAAAGGGAA CAAGATTATC
GGCATCCCGA GTGAGCGAGC CAAGAATCGT GAAGAACTGA TGACCCATTT GCAGTTAGTG
CCAGCCGATA CGCCAGTCAC CCTATGGGCG GGCAAACGTA AGCTCACGCT AAAACCGAGC
GATTTAGAGC ATTACCGTGG TGAGCGTGGC CGTCGCGGCG CCAAACTTCC GCGTGGATTA
CAGCGTGTTG ATAGCGTGGA ATTAGGCGAA GGTGCTGAGG TTTTGCCTAG CATTTAG
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| Protein sequence | MSDAIKLSLD GVEQMPLRRF TEEAYLNYSM YVIMDRALPH IGDGLKPVQR RIIYAMSELG
LSAQSKHKKS ARTVGDVLGK YHPHGDSACY EAMVLMAQPF SYRYPLVDGQ GNWGAPDDPK
SFAAMRYTEA RLSKFSEVLL SELGQGTVEW GANFDGTLKE PKVLPARLPH ILLNGITGIA
VGMATDIPPH NARELVNACV ALLDDPKLEL EQLMGYVPGP DYPTEAEIIT PSADIAKIYE
TGRGSLKARA VYSVEAGEIV ITALPHQASS GKILEQIAAQ MQAKKLPMVA DLRDESDHEN
PVRLVVVPRS NRVDCDQLMA HLFATTDLEK SFRVNLNVLG LDGRPRVKGL KELLTEWLEF
RVDTVRRRLE YRLDKVLARL HILEALMIAF LNIDEVIEII RFHDEPKAEL MARFNLTDRQ
AEAILELKLR HLAKLEEFKI KAEQDELEAE REKLEQLLSS ERRLKTLIKK ELIQDGETYG
DDRRSPIVER HESRALTEQE LTPSEPVTVV LSEKGWVRCA KGHDIDAESL SYKAGDQYLC
SAMGRSNQAA VFIDSSGRAF ATDSHSLPSA RSQGEPITTR FNMAPGETMQ HVILGEDEQC
FLLATDAGYG FICTYNDMVS RNKAGKALLS LPPNAKSLPP RLIDRSREMS ILAITNEGRM
LLFSLEALPQ LSKGKGNKII GIPSERAKNR EELMTHLQLV PADTPVTLWA GKRKLTLKPS
DLEHYRGERG RRGAKLPRGL QRVDSVELGE GAEVLPSI
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