Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0759 |
Symbol | |
ID | 4255832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 864707 |
End bp | 865882 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638121370 |
Product | L-sorbosone dehydrogenase, putative |
Protein accession | YP_736816 |
Protein GI | 114046266 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.608473 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00169881 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTGTATA TAAAATCTAA TAATTATAAA TATTTAAGGG TGTTCTCTGC CTATTGGACC CTACTGGCGA GTCTGGCGTT ATTATCGAGT CAGGCTGCGA TAGCGGGGTC TCAGTCGATC ATGATTACCG TGTCCAAGGG ATTTGGTTTA TCCCTTTATG CCTCCGATCT GGGGGATGCT AAACAGATTG CCATGGGGGC TAACGGCACA CTATTCGTGG GGTCCAATAA GAGTGGTACA GTGCATGCGC TCGTTGACAG CAACCAAGAT GGCCGTGTCG ATAAGCGTTA TGTGATTGCT AAAGGGCTCG AATCTCCCGA CGCGGTAGCC TTCCATAATG GCGATCTTTT TGTTGCAACC GAAAACCGTA TCGTACGTTT TATTGATATT GAGCAGCGCC TACGCCGTCC GACTCGCCCT AAAGAGATCT ACAGCGATCT ACCTGAATCA GATAAAAAAA GTGCCCGTGC GATGAATTTT GGCCCCGATG GTCGCTTGTA TGTCTCTATC GGCGCACCTT GTAATGTTTG TGAGGCGGGG GCGCCCTATA GCAGCATTAT TGCGATTAAT GTCGACACTG GAGCAAGTGA GCAGATTGCA CTGGGCGTAC GTGATGCGAC TGGATTTGAC TGGTCTCCCC AAGATGGCAA GTTATGGTTT GCCGATCAGG GCCGTGATTG GATGGGGGAT AACTTACCAC CCGATGAAAT CAACCGGGTC GATGTGATTG GCAGTCATTA TGGCTTCCCG TATTTGCATG CCTCGTCCGT GGTAGAGCCT GCCTACGAAA AGCCTAAAAA TTTAAAAATT ACCGTCCCAG TGTATGAACT GCCAGCCCAT GTTGCACCGA CGGGCCTCGC GTTTTACCGC GGTAAGCAAT TCCCTGAGAT CTACCATAAT CAATTGTTTG TTGCTGAAAA TGGTTCTTGG AACCGTTCAA GCAAAGTGGG TTATCAGATC GTCATGTTGA AACTCGAGAA TGAGCAAGTT GTCAGCCGTG AAACCGTAGT GAGTTTTCTT GATGGCGAGT TTCCCGTTGC CCGTCCCTAT GCACTGTTAT CGGGGGAAGA TGGCGCAATG TACATCTCGG ATGATTTGAA AGGTAACCTG TATCGGCTGT TCTATAGGGA TGGCGATAAT ACTGAAGAAC CACAGGAACT AGAAGAAAAT GAGTGA
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Protein sequence | MLYIKSNNYK YLRVFSAYWT LLASLALLSS QAAIAGSQSI MITVSKGFGL SLYASDLGDA KQIAMGANGT LFVGSNKSGT VHALVDSNQD GRVDKRYVIA KGLESPDAVA FHNGDLFVAT ENRIVRFIDI EQRLRRPTRP KEIYSDLPES DKKSARAMNF GPDGRLYVSI GAPCNVCEAG APYSSIIAIN VDTGASEQIA LGVRDATGFD WSPQDGKLWF ADQGRDWMGD NLPPDEINRV DVIGSHYGFP YLHASSVVEP AYEKPKNLKI TVPVYELPAH VAPTGLAFYR GKQFPEIYHN QLFVAENGSW NRSSKVGYQI VMLKLENEQV VSRETVVSFL DGEFPVARPY ALLSGEDGAM YISDDLKGNL YRLFYRDGDN TEEPQELEEN E
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