Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0752 |
Symbol | |
ID | 4257905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 857879 |
End bp | 858574 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638121363 |
Product | hypothetical protein |
Protein accession | YP_736809 |
Protein GI | 114046259 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000104845 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.017498 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACTT CTGCCCAAGC GGCTACTGTG GTTGGATTCA AAATTGGTGG TGATTACTGG CGCGCCGATA CTAGCGGTAC TTTTGCCGAT AAAGGTCAAC CACAACAAGG TTTTGACTAC AGCTCATCGG CGCAGGGCAG CTATTGGGTT GCGGTTGAGC ATCCGCTACC ATTTATCCCG AATCTTAAAA TTCGTGAAAA TAGCTTAGAT CAGAAGGGGA GTCTCACGAA TGCAGACTTC ACTTTCAATG GTCATGATTT TACTGGCAAT GTGACCAGTT ATACCGACTT GAGCAACACA GATTTTGTGC TGTATTACGA GTTGCTGGAT AACGATATTC TGTCTTTGGA TCTAGGTGCC GCCTACAAGC TGATGAACGG CTATCTGCGC GTTCAAGATG CGGGCCATCC TGAAGAGAAA GACGTCGATA GCGGCATTGT GATGGGTTAT GCCAGTACTC AAGTGAGCAT GCCAGGCTTA GGCCTATTCG GCTTTGCGGA TCTAATGCTT GGGGTAAATG AATCTAACGT GCATGACTAT GCCATCGGTT TAGGTTGGGA GTTCGACGGC ATGGCCGTGG ATACCCGTGT ACGCGTTGGC TACCGTGAAT TTGCCTTTGA TGTGAATAAT TTCTCTGGCA TCAGCGCTGA TACTAAGTTT GACGGTTATT TCGCGGGTGT AGAAATTGAT TTCTAA
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Protein sequence | MATSAQAATV VGFKIGGDYW RADTSGTFAD KGQPQQGFDY SSSAQGSYWV AVEHPLPFIP NLKIRENSLD QKGSLTNADF TFNGHDFTGN VTSYTDLSNT DFVLYYELLD NDILSLDLGA AYKLMNGYLR VQDAGHPEEK DVDSGIVMGY ASTQVSMPGL GLFGFADLML GVNESNVHDY AIGLGWEFDG MAVDTRVRVG YREFAFDVNN FSGISADTKF DGYFAGVEID F
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