| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0746 |
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| Symbol | |
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| ID | 4257899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 853591 |
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| End bp | 854613 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638121357 |
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| Product | tRNA-dihydrouridine synthase A |
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| Protein accession | YP_736803 |
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| Protein GI | 114046253 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.807412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.103505 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACA AAAAACAAGA CATAAAGCCA TGTATAGCGC AGGAATCAAT AGATAGAACC
TTTTCCATTG CGCCTATGCT CGATTGGACG GATCGTCATT ACCGTTATTT TGCTCGCTTA
ATGTCGGCAA ATGCCTTGTT GTATACCGAG ATGGTGACGA CAGGGGCGAT TTTGCATGGC
CGTGGTGATT ATCTTGCCTA TAACCAAGAA GAACATCCCC TTGCATTGCA ATTGGGGGGC
TCGAATCCTG CTGAACTTGC TCGCTGCGCC AAACTTGCCG CCGAGCGCGG TTATGATGAA
GTGAACCTCA ATGTGGGCTG TCCTTCCGAT CGCGTGCAAA ACGGTCGCTT TGGTGCCTGT
TTGATGGCCG AGCCTGAGCT GGTGGCTGAG TGTGTCGATG CCATGAAGCA AGTGGTTGAT
ATTCCTGTGA CGGTAAAAAC GCGCATCGGC ATTGACGAGC AGGATAGCTA TGAGTTTTTG
ACTCACTTTA TTGATACTGT TATGGCTAAA GGCTGTGGTG AGTTTATTAT TCATGCGCGT
AAGGCGTGGC TGCAGGGCTT AAGTCCGAAG GAAAATCGCG AGATCCCGCC CTTAGACTAC
GACCGGGTGT ATCAGCTTAA GCGTGATTAC TCGACGCTCA ATATCAGCAT TAACGGTGGC
ATCACTAGCC TTGAACAGGC TAAAACCCAC TTGCAACACT TAGATGGTGT GATGGTAGGA
CGTGAGGCTT ACCAAAATCC CTATATTTTA GCGCAGGTTG ACCAACTGCT CTGCGGCAGC
CAGAAGGCGG TTATTAGCCG TGAAGCTGTG ATTGAGGCTA TGTTGCCCTA TATCGAGGCT
CACTTGCAGG CGGGCGGGCG CTTAAATCAT ATCACTCGCC ATATGATCGG CTTATTCCAA
GGCTTACCGG GTGCCCGTGC GTGGCGTCGT TATTTGAGCG AAAACGCCCA TAAAAATGGT
GCAGGTATTG AGGTGGTCAA ACAGGCTTAC CAAAGTATTC AGAGCGAAAT AATTGCTCAA
TAA
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| Protein sequence | MKHKKQDIKP CIAQESIDRT FSIAPMLDWT DRHYRYFARL MSANALLYTE MVTTGAILHG
RGDYLAYNQE EHPLALQLGG SNPAELARCA KLAAERGYDE VNLNVGCPSD RVQNGRFGAC
LMAEPELVAE CVDAMKQVVD IPVTVKTRIG IDEQDSYEFL THFIDTVMAK GCGEFIIHAR
KAWLQGLSPK ENREIPPLDY DRVYQLKRDY STLNISINGG ITSLEQAKTH LQHLDGVMVG
REAYQNPYIL AQVDQLLCGS QKAVISREAV IEAMLPYIEA HLQAGGRLNH ITRHMIGLFQ
GLPGARAWRR YLSENAHKNG AGIEVVKQAY QSIQSEIIAQ
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