Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0740 |
Symbol | |
ID | 4255129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 847056 |
End bp | 849470 |
Gene Length | 2415 bp |
Protein Length | 804 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 638121351 |
Product | hypothetical protein |
Protein accession | YP_736797 |
Protein GI | 114046247 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.148457 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCATCAG TAATCACAAT CGCAGGTGAA CAACTCTTTG CGGCAAAAGC TCAGGCTAAT GAACAGCTCG ACATTGACAC CTTTATTTTT GCCAACGTGC CAAACCAAGA CCCAAGCGCG CCCATTAATC GCGAAGAGGG CATCCCCACA GCGCACATTG TGTATCAGCA AAATGTGCAG CAAGTGGGCC GCGTTAACGA TAACGTGGTG GTGTACTCCA CCGTGTTAGA TAGCATTACT GGCCCGTTCG AGTTTAACTG GGTAGGGCTG TATTCATCAG TTAACCAAAA GTTAGTCGCC ATTAACCATG TGCCAACAGT AACAAAAACA GTTACAGCAC CAGGTGAAGC AGGTAACACC CTAAATCGTA ACTTTGGTAT TGAGTACAGC GGCATTGCAG CATTAACAAA CATTACAGTT GATGCAGAAA CGTGGCAGTT AAATTTTACC GCCCGCTTAA GCGGCATGGA TAAGCTCACC CAGCAGTTAG CAGCCGACAT GAACGGCAAA GACTGGTTTA TTGACGATGG CCTAAAAGTT GTGCCACGCG CCACAGCAAA CACCTTTAGC GTAACGCCAG GTGTGGGCTA TGTGTCTGGC CTACGGGTAG AGCTCAAGCA AGAGCATATT TTAATCGTTC AAAGCTATCC GCAGTTTGTT TACGTCGACG CATGGTTCAG CGGCAACGCC AACAGCACAT GGTCGCCACA ACTCGCCTTT ACAGTGACCA ACACCGAAAT GGACGACTAC ATCGACCCAA GCGGCACACA GCACTATGTG TATAAATTGG CGGTGATCAA TGCGGCAGAT GATGTGGGAG ATTTAAGAAT AGAAGGAGTT CAGGCAAATA AAGAATGGGT AAAAAATTTA TCACCATCGA CATTTTCAAC AGATTGGACA TTTGATAGCG CACAAGAGAT GAAAGCCTTC AATAAATTAA GCTCAGGTGA AAAGTGTCGA ACATTTGGAT ATAAAAACAT TAATGATGGT GGCGGGTCAA TCTATGTGAT TGTAAATGAT GAGTTAGAAA GTGATGATGG AAACATAATA TTATTGAACA ATGGACTTTT TGCGGTAAGG ATTAATAAAG ATTTTGTTAA ATCTTCTGAG TACGGCGCAT CAGAAATTGA TTCAACATCT GAAATAAATG GCGCCTTGAA TGGAAGTAGG TTTTTGACGA TAGATGTTGA TGTTTCATGT AAGAATGTTG CACCTAAGAA AGGATCTGTG ATTGATATAT CTAAATCAAT ATTACTTCCT GTAAACTCTG ATAACGGTGA TGCTGTAATA AGTAATGAAG GTCAAGATAA GTTATTGATT AGTGGCAATG GTTTAATATC TGGTAATAAA CATCAGCAAG CAGGAGAAAA TCAGCATAAA TTAATACACT TATCAACAAA TGATAGTAAA GTACATGGGA TAGAATTAGG GTGGAATTAC AGTAAGGAAT CACCGACTGA ATCTATTAAC TGTGTATCAA TGGAAGGCGA TAGAAATATC ATGTCAGCAT TAAGATTATC ATCATGGTCA CAAGAGGGAT TAGTACTTAA GAACAGCAAA TATTGCACAG TAAATAATAT TGTTGCTAAT GATGAAGATA GTGATTCATG GAGCGCCGTC CAAATTCATG GTTCTCACAA TCTTATTGAT AGCATTATAA CTAAAAATAC TGGCGCTTCG TCTGTTGGTT GTGACTCGCA ACACTCTATA GTGAACAATA TTATTTCTGA TACAATTAGA TATCATAACG GTGTAAATTT TGGACACGAA AACAAAACTG CTGATTATTC TGTTGCATCG AATATTATTA TCACAAACCT GAATGATGAA GTGAATCCAA ATGCTGCTGG TCTCTCAGTT TCAAATGGGA CTAAATACAT ATCTGTAAAT AATTTCTCAA TGAAAAACCC AACGCAAAAT AAAGCGAACA AAGGAATAAA CATTAGTAAT GGCGGTGCGA ATAATCAGCT TTCAAATACG GTTATTGACG GAGCTGTAAC GGGAGTTAAT TTATATAGCT GTGAATATAC ATCAGTATGT AATATGATGT TAATGAATTG CGATTACGGT ATAAATAAAA ATGATGATTC AATTTTGCAA ATGATTAATG TTGATTTAAG CGGCTCATTA GTTCAGTTGA CAGGGGCGGG GGCAACTCAA AAAACTAGGG CGGTTAATGC TATATTTGAT AGAAACGACA GCTTTAGTGG TGGGATTTCA TTAACTTCTA TTTCTTTCCC TTATAGAGTT TCAACAAAAA ACATGCGTGA ATTTTCTACG CTAGTTATTG AACCTAGCAA TGCGAATGGA GCAAAAGCTT TAGTTTATGT ATCTGTTAGA GCAAATGGCT ATTTTGAAAT TAATGTAGCG GGAACGGTAG ATAGTGGAGC GCATATAAGA TGGAGAATCG TTTAA
|
Protein sequence | MASVITIAGE QLFAAKAQAN EQLDIDTFIF ANVPNQDPSA PINREEGIPT AHIVYQQNVQ QVGRVNDNVV VYSTVLDSIT GPFEFNWVGL YSSVNQKLVA INHVPTVTKT VTAPGEAGNT LNRNFGIEYS GIAALTNITV DAETWQLNFT ARLSGMDKLT QQLAADMNGK DWFIDDGLKV VPRATANTFS VTPGVGYVSG LRVELKQEHI LIVQSYPQFV YVDAWFSGNA NSTWSPQLAF TVTNTEMDDY IDPSGTQHYV YKLAVINAAD DVGDLRIEGV QANKEWVKNL SPSTFSTDWT FDSAQEMKAF NKLSSGEKCR TFGYKNINDG GGSIYVIVND ELESDDGNII LLNNGLFAVR INKDFVKSSE YGASEIDSTS EINGALNGSR FLTIDVDVSC KNVAPKKGSV IDISKSILLP VNSDNGDAVI SNEGQDKLLI SGNGLISGNK HQQAGENQHK LIHLSTNDSK VHGIELGWNY SKESPTESIN CVSMEGDRNI MSALRLSSWS QEGLVLKNSK YCTVNNIVAN DEDSDSWSAV QIHGSHNLID SIITKNTGAS SVGCDSQHSI VNNIISDTIR YHNGVNFGHE NKTADYSVAS NIIITNLNDE VNPNAAGLSV SNGTKYISVN NFSMKNPTQN KANKGINISN GGANNQLSNT VIDGAVTGVN LYSCEYTSVC NMMLMNCDYG INKNDDSILQ MINVDLSGSL VQLTGAGATQ KTRAVNAIFD RNDSFSGGIS LTSISFPYRV STKNMREFST LVIEPSNANG AKALVYVSVR ANGYFEINVA GTVDSGAHIR WRIV
|
| |