| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0712 |
|---|
| Symbol | |
|---|
| ID | 4255154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 826174 |
|---|
| End bp | 828522 |
|---|
| Gene Length | 2349 bp |
|---|
| Protein Length | 782 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 638121323 |
|---|
| Product | bacteriophage replication gene A |
|---|
| Protein accession | YP_736769 |
|---|
| Protein GI | 114046219 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0364849 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCACG ATGATTTAAT CCGTAAAGCC GCGATTAATG TCGCGGCGAT TTTTACGCGG
CCGCACTCAA TTGCTGATCT CAATTGGGCG GTAAAAACCG TTATCGATTT GCCGGAAGAT
GTGGCCGTCA CCCTGTTCCG CGAATACTGC CGCAAGCGCC GCGCGCTAAA TCTTGGCCGT
AGCGCAAACA TTTGGCTGCG TAAACGCTGC GCCTCGCTGC GCCAGATTAT GCAGCAGTTC
CCAATCCCTA TTTATCACCT AAAAACCGAA GACCGTCGCG CCGATATCGC CCGCGAATGG
GCCGACCGTT GCCTCAGTGT GCTCAACAAT CTAACCCAGT TCGGCACCGT GCAAGTGGAT
GCGCTCGAAC TGCTTAAAGC GGTCAAAGAG CCAGCCGACC AATGGCAGTT TTGCCCAGCA
CTGCCAGACC TAAAACACTA CTACGCGCAA AAAGCCGCAG GCGTATTTGA TGCCTCGCCC
GTCATGTATA ACCTGATCGC GGGCGCACTG GCGCGGCTTA CGGATGAAAA CTGGTGGGAG
CGTAAGCTAA ACAAGGCTTA CGGCCATTAT GAGGAGCATA TCGCGATCAT CGTTGGCAAA
GTCCGCAGCG GTGTATCGCC ATATGTTTCT AACCATGCCT ATAAGCAGTA TCAAGCCCGT
AAACGTGCCA ATGCGGCATG GCTCAATAGC ATGATGGTGG TTAACGAGGA ACACGGCATC
GAGTTAACCC TCGCCGATGC CGTGGCCGCT TCAATCGCTA ACCCAGAAGT GCGCCGCGCT
GAATTGATGG TCCGTATGCG TGGCTTTGAG GAGCTAGCCG TCGAAGGCGG TTATGTGGGC
GAGTTTTACA CTTGGACAGC GCCAAGTAAG TTCCACTCCT ACGGCAAAAG CAAAAAGGGC
AAAACCTACT CAAACAAGCG TTACAGCGGC GTCACCCCAA AAGATACTCA ACGCTATTTA
TGCGGCCAAT GGGCCAAAGC CCGCGCCGCC TTTGCCCGTG AAGATATCGA AGTATTTGGC
TTTCGCGTGG TCGAACCGCA CCACGACGGC ACACCGCACT GGCACTTATT ACTGTTTTTT
AAACCAGCAC AACTGCGCCT AGCGCGCTCC ATTATGCGCC GCTATGCCCT GCAAGATGAC
AAAGCCGAAC TGGCACCACC TAAGGGCAAG CGCGGGGCTA ACTTCCAAGG CTACCGCCCA
CGGTTTGACT TTAAAACCAT TGACCCAGCC AAGGGCAGCG CCACAGGCTA CATCGCCAAA
TACATCGCCA AAAACATCGA CGGCCACATG GTAGACGATG ACTACGAGGC CGAAACCGAC
GGCAAGCAAG GCGCGCAAAA CGTGGCGGCA TGGGCCAGCA CATGGAACAT TCGCCAGTTT
CAACAAATCG GTGGGCCTAG CGTTACCGTG TGGCGCGAGC TGCGCCGCCT GCGCGATGAA
ATCGACTTTG ACGAAGCCGT CGAACTCGCC CGCAAAGCCA GCGACGGCAA CACCTCAACC
CATTGGGCGC GCTATGTCGA GGCCATGGGC GGGGTATTCT GCCGCCGTGA TGAACGTCCG
GTACAACTAG CGAAGGTTTG CCATGAAGGG GCCAACGTCT ACGGCGAAGA TGTGTTGAAA
ATCATGGGCG TGATGTCGCT CGAAAATCAC ACCTATATTA ATACCCGCCT CGATGGCTGG
AAAATCAGCG CGCCACAGGC CGCCACCGAG CCGCCAAGCG CCGAGGAACG GGCTTTTGAT
CGTGCTCTTG ATTTGGCTTT TGATTTGGCT TCTAAAAGCG GTGACAACCG CGCACCTTGG
AGCTCTGACA ATAACTGTAC GCAGTCGATC AAAACCAGCG GAAAGATCGC GAATGAGATC
AAAACAGCGG ATTGGATGCT CATTCAAGAG GCCAAAAAGT TGGGTATCGA CGCGGATAAT
CTTAAGCGCC TACGTGCGGG GGCTGTGATT GATAACGTGG TGGGTGATGT TCATCAGTTT
GTGCGCTTGC GCAATGGTCA TTTAATAGTC AGCCGTAAAC CGTTAGTTGC CGTGGATACC
ACGGCCACAC AAAACGACTG GGACGATCCC GCCTTAAATT ATCAGTTAGA AGCCATGCAG
CGCGCCCAAG ATAAAGACCT AGACGCCATA CTGCGCGCCC AAGCGTGGCG CGTGCTCGAT
GGTGATCGCG ACGTAGAGCA CTGGATTGCC GACATGCCGC CAGCCACAGC CAAACGCGCA
CTTAAGCAGT TAGCCGAAAT TGTGAAGTTA CATAAAGACG ACAAATACGC TTTCCCCTAT
GTCGAAAAAC CAAAAGAGAA AGCCACCACC TTTGACGATG AGAGAGAGGA CTGGGATGAA
GCATTCTAA
|
|---|
| Protein sequence | MTHDDLIRKA AINVAAIFTR PHSIADLNWA VKTVIDLPED VAVTLFREYC RKRRALNLGR
SANIWLRKRC ASLRQIMQQF PIPIYHLKTE DRRADIAREW ADRCLSVLNN LTQFGTVQVD
ALELLKAVKE PADQWQFCPA LPDLKHYYAQ KAAGVFDASP VMYNLIAGAL ARLTDENWWE
RKLNKAYGHY EEHIAIIVGK VRSGVSPYVS NHAYKQYQAR KRANAAWLNS MMVVNEEHGI
ELTLADAVAA SIANPEVRRA ELMVRMRGFE ELAVEGGYVG EFYTWTAPSK FHSYGKSKKG
KTYSNKRYSG VTPKDTQRYL CGQWAKARAA FAREDIEVFG FRVVEPHHDG TPHWHLLLFF
KPAQLRLARS IMRRYALQDD KAELAPPKGK RGANFQGYRP RFDFKTIDPA KGSATGYIAK
YIAKNIDGHM VDDDYEAETD GKQGAQNVAA WASTWNIRQF QQIGGPSVTV WRELRRLRDE
IDFDEAVELA RKASDGNTST HWARYVEAMG GVFCRRDERP VQLAKVCHEG ANVYGEDVLK
IMGVMSLENH TYINTRLDGW KISAPQAATE PPSAEERAFD RALDLAFDLA SKSGDNRAPW
SSDNNCTQSI KTSGKIANEI KTADWMLIQE AKKLGIDADN LKRLRAGAVI DNVVGDVHQF
VRLRNGHLIV SRKPLVAVDT TATQNDWDDP ALNYQLEAMQ RAQDKDLDAI LRAQAWRVLD
GDRDVEHWIA DMPPATAKRA LKQLAEIVKL HKDDKYAFPY VEKPKEKATT FDDEREDWDE
AF
|
|---|
| |