Gene Shewmr7_0686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0686 
Symbol 
ID4254997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp807099 
End bp807854 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content45% 
IMG OID638121299 
Producthypothetical protein 
Protein accessionYP_736745 
Protein GI114046195 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3137] Putative salt-induced outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000157748 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000330115 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTACGAG CAATACTAAA AGTTATCGCC CCTTTAAGTT TTTTTTGCCT ATCTTTTCCG 
GCACTTGCGC TTGTACCTCC CGATTATCAG GAACCGCCAA GCGATTTTAC TGCTGAAGTC
GAAGCGGGCT TACAGTTGAA CACGGGTAAT ACCGAGTCGA GCAGTTTTAA TGGTCGCACC
CAGCTGATTT ATGATGCCAA GCAAACGAAG CAAGAAGCCA CGCTAAAAGC GTATTTTGCT
TCAGAGAAAA ACCAAACCAC CTCAGAGAAG TACGAACTCC AACTGCAGAG CAACTATAAA
CTCACTAAGG GCTATATCTT TGGCCGGGGC GATTTTACTT GGGATCAGTT CGGTAGTTAT
ACCCAAATCT CAACCCTATC ATCGGGTTAT GGTTTTAATG CCATCAGCAG CTATAAGACC
AAACTCAGCC TAGAAGTCGG TCCGGGTTAT CGTTACAACC TGCCAGCAGA ATCGATAACA
GAGCCGGATC CCGCCGCCGA AAAAGATGTG ATCCTACGTA CTGCGGCAAA GTTTTCGCAA
AAATTGCAGG AATACACCAG CATCAATGCG GACCTAACCG CCGAAGTGGG CGAAAATAAC
AATACCCTTA CCCTCGATAT GAACTACAAA AATTTAGTGT TTCAGGATTG GGCATTTAAG
ATTGGTATGA ACATCAAATA TACCGAAGTG GTGCCCGAAG GCAGTAAGCA GACTGACACT
GTCACCACCT TTAACTTGCT CTACACCTTT AGATAA
 
Protein sequence
MLRAILKVIA PLSFFCLSFP ALALVPPDYQ EPPSDFTAEV EAGLQLNTGN TESSSFNGRT 
QLIYDAKQTK QEATLKAYFA SEKNQTTSEK YELQLQSNYK LTKGYIFGRG DFTWDQFGSY
TQISTLSSGY GFNAISSYKT KLSLEVGPGY RYNLPAESIT EPDPAAEKDV ILRTAAKFSQ
KLQEYTSINA DLTAEVGENN NTLTLDMNYK NLVFQDWAFK IGMNIKYTEV VPEGSKQTDT
VTTFNLLYTF R